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Glomerulus Detection on Light Microscopic Images of Renal Pathology with the Faster R-CNN

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Neural Information Processing (ICONIP 2018)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 11307))

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Abstract

Glomerulus is an important component in human kidney. The appearance of the glomeruli on light microscopic image can provide abundant information for disease diagnosis. Due to the importance of glomeruli on accurate renal disease diagnosis, this paper proposes an automatic method to detect glomeruli in light microscopy images with Periodic Acid Schiff (PAS) or hematoxylin and eosin (H&E) stains at 100x, 200x, or 400x optical magnification. The faster region-based convolutional neural network (R-CNN) is applied to the detection task. The proposed detection approach performs an end-to-end glomerulus detection without any a priori information of the stains and magnifications of the images. The training dataset contains 2,511 images with 3,956 glomeruli. The test dataset contains 482 images with 563 glomeruli. The recall and precision of the test result are 91.54% and 86.50%, respectively, which shows the effectiveness of the proposed detection method.

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References

  1. Wen, C.P., et al.: All-cause mortality attributable to chronic kidney disease: a prospective cohort study based on 462293 adults in Taiwan. Lancet 371(9631), 2173–2182 (2018)

    Article  Google Scholar 

  2. Hirohashi, Y., et al.: Automated quantitative image analysis of glomerular desmin immunostaining as a sensitive injury marker in Spontaneously Diabetic Torii rats. J. Biomed. Image Process. 1(1), 20–28 (2014)

    Google Scholar 

  3. Kato, T., et al.: Segmental HOG: new descriptor for glomerulus detection in kidney microscopy image. BMC Bioinform. 16(316), 1–16 (2015)

    Google Scholar 

  4. Kotyk, T., et al.: Measurement of glomerulus diameter and Bowman’s space width of renal albino rats. Comput. Methods Programs Biomed. 126, 143–153 (2016)

    Article  Google Scholar 

  5. Pedraza, A., Gallego, J., Lopez, S., Gonzalez, L., Laurinavicius, A., Bueno, G.: Glomerulus classification with convolutional neural networks. In: Valdés Hernández, M., González-Castro, V. (eds.) MIUA 2017. CCIS, vol. 723, pp. 839–849. Springer, Cham (2017). https://doi.org/10.1007/978-3-319-60964-5_73

    Chapter  Google Scholar 

  6. Gallego, J., et al.: Glomerulus classification and detection based on convolutional neural networks. J. Imaging 4(20), 1–19 (2018)

    Google Scholar 

  7. Sasase, T., Ohta, T., Masuyama, T., Yokoi, N., Kakehashi, A., Shinohara, M.: The spontaneously diabetic torii rat: an animal model of nonobese type 2 diabetes with severe diabetic complications. J. Diabetes Res. 2013, 1–12 (2013)

    Google Scholar 

  8. Krizhevsky, A., Sutskever, I., Hinton, G.: Imagenet classification with deep convolutional neural networks. In: Proceedings of the Advances in Neural Information Processing Systems, pp. 1097–1105 (2012)

    Google Scholar 

  9. Szegedy, C., et al.: Going deeper with convolutions. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, Boston, pp. 1–9 (2015)

    Google Scholar 

  10. Ren, S., He, K., Girshick, R., Sun, J.: Faster R-CNN: towards real-time object detection with region proposal networks. IEEE Trans. Pattern Anal. Mach. Intell. 39(6), 1137–1149 (2017)

    Article  Google Scholar 

  11. Zhao, X., Li, W., Zhang, Y., Gulliver, T.A., Chang, S., Feng, Z.: A faster RCNN-based pedestrian detection system. In: Proceedings of the IEEE 84th Vehicular Technology Conference (VTC-Fall), pp. 1–5 (2016)

    Google Scholar 

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Correspondence to Chia-Feng Juang .

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Lo, YC. et al. (2018). Glomerulus Detection on Light Microscopic Images of Renal Pathology with the Faster R-CNN. In: Cheng, L., Leung, A., Ozawa, S. (eds) Neural Information Processing. ICONIP 2018. Lecture Notes in Computer Science(), vol 11307. Springer, Cham. https://doi.org/10.1007/978-3-030-04239-4_33

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  • DOI: https://doi.org/10.1007/978-3-030-04239-4_33

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-04238-7

  • Online ISBN: 978-3-030-04239-4

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