An Overview of Genome Databases

  • David W. Ussery
  • Trudy M. Wassenaar
  • Stefano Borini
Part of the Computational Biology book series (COBO, volume 8)

Keywords

Genome Database Bacterial Genome European Molecular Biology Laboratory Sequence Entry Genomic Standard Consortium 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Recommended Reading

  1. Field D, Feil EJ, Wilson GA. “Databases and software for the compariison fo prokaryotic genomes”. Microbiology, 151:2125–2132 (2005). [PMID: 16000703]CrossRefGoogle Scholar
  2. Selengut JD et al., “TIGRFAMs and genome properties: tools for the assignment of molecular function and biological processes in prokaryotic genomes. Nucleic Acids Res, 35:D260–264 (2007). [PMID:17151080]CrossRefGoogle Scholar
  3. Romualdi et al., “GenColors: annotation and comparitive genomics of prokaryotes made easy”. Methods Mol Biol, 395:75–96 (2007). [PMID: 17993668]Google Scholar
  4. Pachkov M, Erb I, Molin N, Van Nimwegen E. “SwissRegulon: a database of genome-wide annotations of regulatory sites’, Nucleic Acids Res, 35:D127–131 (2007). [PMID: 17130146]CrossRefGoogle Scholar

Copyright information

© Springer-Verlag Berlin Heidelberg 2009

Authors and Affiliations

  • David W. Ussery
    • 1
  • Trudy M. Wassenaar
    • 2
  • Stefano Borini
    • 3
  1. 1.Department of Systems BiologyThe Technical University of DenmarkLyngbyDenmark
  2. 2.Molecular Microbiology and Genomics ConsultantsZotzenheimGermany
  3. 3.Laboratory of Physical Chemistry Swiss Federal Institute of Technology (ETH)ZurichSwitzerland

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