Alcala AC, Gomez ED (1987) Dynamiting coral reefs for fish: a resource destructive fishing method. In: Salvat B (ed) Human impacts on coral reefs: facts and recommendations. Antenne Museum E.P.H.E, French Polynesia
Bruno JF, Selig ER (2007) Regional decline of coral cover in the indo-pacific: timing, extent, and subregional comparisons. PLoS One 2:1–8
Burke L, Reytar K, Spalding MD et al (2011) Reefs at risk revisited. World Resources Institute, Washington, DC
Burkepile DE, Hay ME (2008) Herbivore species richness and deeding complementarity affect community structure and function on a coral reef. Proc Natl Acad Sci USA 105:16201–16206
Cinner JE, McClanahan TR, Daw TM et al (2009) Linking social and ecological systems to sustain coral reef fisheries. Curr Biol 19:206–212
Dublin HT, Sinclair ARE, Mcglade J (1990) Elephants and fire as causes of multiple stable states in the Serengeti-Mara woodlands. J Anim Ecol 59:1147–1164
Gardner TA, Côté IM, Gill JA et al (2003) Long-term region-wide declines in Caribbean corals. Science 301:958–960
Graham NAJ, Nash KL (2013) The importance of structural complexity in coral reef ecosystems. Coral Reefs 32:315–326
Graham NAJ, Wilson SK, Jennings S et al (2006) Dynamic fragility of oceanic coral reef ecosystems. Proc Natl Acad Sci USA 103:8425–8429
Graham NAJ, Bellwood DR, Cinner JE et al (2013) Managing resilience to reverse phase shifts in coral reefs. Front Ecol Environ 11:541–548
Holling CS (1973) Resilience and stability of ecological systems. Ann Rev Ecol Evol Syst 4:1–23
Hughes TP, Connell JH (1999) Multiple stressors on coral reefs: a long-term perspective. Limnol oceanogr 44:932–940
Hughes TP, Rodrigues MJ, Bellwood DR et al (2007) Phase shifts, herbivory, and the resilience of coral reefs to climate change. Curr Biol 17:360–365
Kauffman EG, Al Fagerstrom J (1993) The Phanerozoic evolution of reef diversity. In: Schluter D, Ricklefs RE (eds) Species diversity in ecological communities: historical and geological perspectives. Universtiy of Chicago Press, Chicago
Kinlan BP, Gaines SD (2003) Propagule dispersal in marine and terrestrial environments: a community perspective. Ecology 84:2007–2020
Knowlton N (1992) Thresholds and multiple stable states in coral reef community dynamics. Am Zool 32:674–682
Lingo ME, Szedlmayer ST (2006) The influence of habitat complexity on reef fish communities in the northeastern Gulf of Mexico. Environ Biol Fishes 76:71–80
Loreau M, Mouquet N, Holt RD (2003) Meta-ecosystems: a theoretical framework for a spatial ecosystem ecology. Ecol Lett 6:673–679
Lundberg J, Andersson E, Cleary G et al (2008) linkages beyond borders: targeting spatial processes in fragmented urban landscapes. Landsc Ecol 23:717–726
Marcus JE, Samoilys MA, Meeuwig JJ et al (2007) Benthic status of near-shore fishing grounds in the central philippines and associated seahorse densities. Mar pollut bull 54:1483–1494
*McClanahan TR, Graham NAJ, MacNeil MA et al (2011) Critical thresholds and tangible targets for ecosystem-based management of coral reef fisheries. Proc Natl Acad Sci USA 108:17230–33. Quantifies resilience by comparing fish biomass to metrics characterizing the state of the ecosystem. This paper also considers the fisheries and ecosystem management strategies that correspond to the various ecosystem states.
McCook LJ, Almany GR, Berumen ML et al (2009) Management under uncertainty: guide-lines for incorporating connectivity into the protection of coral reefs. Coral Reefs 28:353–366
Moberg F, Folke CS (1999) Ecological goods and services of coral reef ecosystems. Ecol Econ 29:215–233
Mumby PJ, Harborne AR, Williams J et al (2007) Trophic cascade facilitates coral recruitment in a marine reserve. Proc Natl Acad Sci USA 104:8362–8367
*Nyström M, Folke C (2001) Spatial resilience of coral reefs. Ecosystems 4:406–417. In-depth discussion of various aspects of spatial resilience.
Nyström M, Folke CS, Moberg F (2000) Coral reef disturbance and resilience in a human-dominated environment. Trends Ecol Evol 15:413–417
*Nyström M, Graham NAJ, Lokrantz J et al (2008) Capturing the cornerstones of coral reef resilience: linking theory to practice. Coral Reefs 27:795–809. Discusses approaches to operationalizing (quantifying) resilience.
*Nyström M, Norström AV, Blenckner T et al (2012) Confronting feedbacks of degraded marine ecosystems. Ecosystems 15:695–710. Explores how human actions influence ecological feedbacks in six marine ecosystems.
*Olds A, Pitt KA, Maxwell PS et al (2012) Synergistic effects of reserves and connectivity on ecological resilience. J Appl Ecol 49:1195–1203. Quantifies the influence of spatial location and protected status on reef fish.
Ostrom E (2009) A general framework for analyzing sustainability of social-ecological systems. Science 325:419–422
Pandolfi JM, Bradbury RH, Sala E et al (2003) Global trajectories of the long-term decline of coral reef ecosystems. Science 301:955–958
Peterson GD (2011) Estimating resilience across landscapes. Ecol Soc 6:17–28
Scheffer M, Hosper SH, Meijer ML et al (1993) Alternative equilibria in shallow lakes. Trends Ecol Evol 8:275–279
Scheffer M, Carpenter SR, Foley JA et al (2001) Catastrophic shifts in ecosystems. Nature 413:591–596
Walker BH, Salt D (2006) Resilience thinking: sustaining ecosystems and people in a changing world. Island Press, Washington, DC, Coral Reefs
Williams ID, Polunin NVC, Hendrick VJ (2001) Limits to grazing by herbivorous fishes and the impact of low coral cover on macroalgal abundance on a coral reef in Belize. Mar Ecol Prog Ser 222:187–196