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A Virtual Flu Epidemic

Exploring Epidemiology with Agent-Based Models

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Python for the Life Sciences

Abstract

In this chapter we will introduce the SIR model, which stands for susceptible–infectious–recovered, a basic conceptual model in the fields of epidemiology, public health, and virology, among others. It will also allow us to introduce the idea of an agent-based model or ABM in which individual entities have their own unique identity within the model. .

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Notes

  1. 1.

    https://docs.python.org/2/tutorial/datastructures.html

  2. 2.

    www.imdb.com/title/tt1598778/

  3. 3.

    http://press.princeton.edu/titles/8108.html

  4. 4.

    www.railsback-grimm-abm-book.com/

  5. 5.

    https://github.com/projectmesa

  6. 6.

    https://pypi.python.org/pypi/pyabm

  7. 7.

    www.swarm.org/

  8. 8.

    https://ccl.northwestern.edu/netlogo/

  9. 9.

    www.openabm.org/

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© 2019 Alexander Lancaster and Gordon Webster

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Lancaster, A., Webster, G. (2019). A Virtual Flu Epidemic. In: Python for the Life Sciences. Apress, Berkeley, CA. https://doi.org/10.1007/978-1-4842-4523-1_18

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