Multiplicity and Complexity of SDR and MDR Enzymes
- 12 Citations
- 397 Downloads
Abstract
Many alcohol dehydrogenases in nature are members of either the MDR (medium- chain dehydrogenases/reductases) or SDR (short-chain dehydrogenases/reductases) protein families In fact, both families were recognized in the early 80ies when an ADH was found be related to another enzyme and thus gave the first enzyme pair known in each family. For SDR the first pair was Drosophila ADH and ribitol dehydrogenase, which showede conservation of the Tyr-X-X-X-Lys active site (Jörnvall et al., 1981). For MDR the initial pair was mammalian ADH class I and sorbitol dehydrogenase, which showed the conservation of the Zinc at the active site and its Cys~46/His~67 ligands (Jeffery et al., 1984; Jörnvall et al., 1981). Since then, known members in both families have grown enormously. From the start, interpretations for MDR were much ahead of those for SDR because of a known three-dimensional structure of MDR already at that time (Eklund et al, 1976).
Keywords
Alcohol Dehydrogenase Sorbitol Dehydrogenase Formaldehyde Dehydrogenase Horse Liver Alcohol Dehydrogenase Formaldehyde EliminationPreview
Unable to display preview. Download preview PDF.
References
- Bonetto, V. Eriste, E., Metsis, M. and Sillard, R. (1998) Extracellular acidification studies in CHO and pancreatic beta cells: a novel detection system for bioactive peptides and hormones. In Enzymology and Molecular Biology of Carbonyl Metabolism 7 (Weiner, H., Lindahl, R. and Crabb, D. W., eds) Plenum, New York, in press.Google Scholar
- Borrâs, T., Persson, B. and Jörnvall, H. (1989) Eye lens ζ-crystallin relationships to the family of“long-chain”al-cohol/polyol dehydrogenases. Protein trimming and conservation of stable parts. Biochemistry 28: 6133–6139.PubMedCrossRefGoogle Scholar
- Danielsson, O. and Jörnvall, H. (1992)“Enzymogenesis”: Classical liver alcohol dehydrogenase origin from the glutathione-dependent formaldehyde dehydrogenase line. Proc. Natl. Acad. Sci. USA 89: 9247–9251.PubMedCrossRefGoogle Scholar
- Danielsson, O., Atrian, S., Luque, T., Hjelmqvist, L., Gonzàlez-Duarte, R. and Jörnvall, H. (1994) Fundamental molecular differences between alcohol dehydrogenase classes. Proc. Natl. Acad. Sci. USA 91: 4980–4984.PubMedCrossRefGoogle Scholar
- Duester, G. (1996) Involvement of alcohol dehydrogenase, short-chain dehydrogenase/reductase, aldehyde dehydrogenase, and cytochrome P450 in the control of retinoid signalling by activation of retinoic acid synthesis. Biochemistry 35: 12221–12227.PubMedCrossRefGoogle Scholar
- Eklund, H., Nordström, B., Zeppezauer, E., Söderlund, G., Ohlsson, I., Boiwe, T., Söderberg, B.-O., Tapia, O., Bränden, C.-I. and Åkeson, Å. (1976) Three-dimensional structure of horse liver alcohol dehydrogenase at 2. 4 Å resolution. J. Mol. Biol. 102: 27–59.PubMedCrossRefGoogle Scholar
- Fernández, M. R., Jörnvall, H., Moreno, A., Kaiser, R. and Parés, X. (1993) Cephalopod alcohol dehydrogenase: purification and enzymatic characterization. FEBS Lett. 328: 235–238.CrossRefGoogle Scholar
- Ghosh, D., Weeks, CM., Groculski, P., Duax, W., Erman, M., Rimsay, R. L. and Orr, J. C. (1991) Three-dimensional structure of holo 3α,20β-hydroxysteroid dehydrogenase: A member of a short-chain dehydrogenase family. Proc. Natl Acad. Sci. USA 88: 10064–10068.PubMedCrossRefGoogle Scholar
- Goodlove, P. E., Cunningham, P. R., Parker, J. and Clark, D. P. (1989) Cloning and sequence analysis of the fermentative alcohol dehydrogenase-encoding gene of Escherichia coli. Gene 85: 209–214.PubMedCrossRefGoogle Scholar
- Gutheil, W. G., Holmquist, B. and Vallée, B. L. (1992) Purification, characterization, and partial sequence of the glutathione-dependent formaldeyde dehydrogenase from Escherichia coli: a class III alcohol dehydrogenase. Biochemistry 31: 475–481.PubMedCrossRefGoogle Scholar
- Jeffery, J., Cederlund, E. and Jörnvall, H. (1984) Sorbitol dehydrogenase. The primary structure of the sheep liver enzyme. Eur. J. Biochem. 140: 7–16.PubMedCrossRefGoogle Scholar
- Jörnvall, H. (1994) The alcohol dehydrogenase system. In Toward a Molecular Basis of Alcohol Use and Abuse(Jansson, B., Jörnvall, H., Rydberg, L. and Terenius L, and Vallée, B. L., eds) Birkhäuser, Basel, pp. 221–229.CrossRefGoogle Scholar
- Jörnvall, H., Persson, M. and Jeffery, J. (1981) Alcohol and polyol dehydrogenases are both divided into two protein types, and structural properties cross-relate the different enzyme activities within each type. Proc. Natl. Acad. Sci. USA 78: 4226–4230.PubMedCrossRefGoogle Scholar
- Jörnvall H. Danielsson O. Hjelmqvist L. Persson B. and Shafqat J. (1996) Alcohol dehydrogenases: isozymes divergence convergence and molecular building units. In Gene families: structure function genetics and evolution(Holmes R. S. Lim H. A. eds) World Scientific Singapore pp. 35–41–Google Scholar
- Koivusalo, M., Baumann, M. and Uotila, L. (1989) Evidence for the identity of glutathione-dependent formaldehyde dehydrogenase and class III alcohol dehydroenase. FEBS Lett. 257: 105–109.PubMedCrossRefGoogle Scholar
- Krook, M., Marekov, L. and Jörnvall, H. (1990) Purification and structural characterizätion of placental NAD+-linked 15-hydroxyprostaglandin dehydrogenase. The primary structure reveals the enzyme to belong to the short-chain alcohol dehydrogenase family. Biochemistry 29: 738–743.PubMedCrossRefGoogle Scholar
- Martinez, M. C., Achkor, H., Persson, B., Fernández, M. R., Shafqat, J., Farrés, J., Jörnvall, H. and Parés, X. (1996) Arabidopsis formaldehyde dehydrogenase. Molecular properties of plant class III alcohol dehydrogenase provide further insights into the origins, structure and function of plant class P and liver class I alcohol dehydrogenases. Eur. J. Biochem. 241: 849–857.PubMedCrossRefGoogle Scholar
- Norin, A., van Ophem, P. W., Piersma, S. R., Persson, B., Duine, J. A. and Jörnvall, H. (1997) Mycothiol-dependent formaldehyde dehydrogenase, a prokaryotic medium-chain dehydrogenase/reductase, phylogenetically links different eukaryotic alcohol dehydrogenases. Primary structure, conformational modelling and functional correlations. Eur. J. Biochem. 248: 282–289.PubMedCrossRefGoogle Scholar
- Persson, B., Nordling, E., Kallberg, Y., Lundh, D., Oppermann, U. C. T., Marschall, H.-U. and Jörnvall, H. (1998) Bioinformatics in studies of SDR and MDR enzymes. In Enzymology and Molecular Biology of Carbonyl Metabolism 7(Weiner, H., Lindahl, R. and Crabb, D. W., eds) Plenum, New York, in press.Google Scholar
- Shafqat, J., El-Ahmad, M., Danielsson, O., Martinez, M. C., Persson, B., Parés, X. and Jörnvall, H. (1996) Pea formaldehyde-active class III alcohol dehydrogenase: Common derivation of the plant and animal forms but not of the corresponding ethanol-active forms (classes I and P). Proc. Natl. Acad. Sci. USA 93: 5595–5599.PubMedCrossRefGoogle Scholar
- Shafqat, J., Höög, J.-O., Hjelmqvist, L., Oppermann, U. C. T., Ibanez, C. and Jörnvall, H. (1998) Studies on variants of alcohol dehydrogenases and its domains. In Enzymology and Molecular Biology of Carbonyl Metabolism 7 (Weiner, H., Lindahl, R. and Crabb, D. W., eds) Plenum, New York, in press.Google Scholar
- Smith, M., Hopkins, D. A. and Harris, H. (1973) Studies on the subunit structure and molecular size of the human alcohol dehydrogenase isozymes determined by the different loci, ADH1, ADH2, and ADH3. Ann. Hum. Genet. 36: 401–414.PubMedCrossRefGoogle Scholar
- Still, J. L. (1940) Alcohol enzyme of Bact. coli. Biochem. J. 34: 1177–1182.Google Scholar
- Uotila, L. and Koivusalo, M. (1989) Glutathione-dependent oxidoreductases: Formaldehyde dehydrogenase. In Coenzymes and Cofactors(Dolphin, D., Poulson, R. and Avramovic O., eds) vol. 3, John Wiley & Sons, New York, pp. 517–551.Google Scholar
- Vallee, B. L. and Bazzone, T. J. (1983) Isozymes of human liver alcohol dehydrogenase, in Isozymes: Current Topics in Biological and Medical Research, Vol. 8 (Rattazzi, M., Scandalios, J. G. and Whitt, G. S., eds), Alan R. Liss, New York, pp. 219–244.Google Scholar
- Young, E. T. and Pilgrim, D. (1985) Isolation and DNÀ sequence of ADH3, a nuclear gene encoding the mitochon-drial isozyme of alcohol dehydrogenase in Saccharomyces cerevisiae. Mol. Cell. Biol. 5: 3024–3034.PubMedGoogle Scholar