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An Overview of Association Mapping

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Association Mapping in Plants

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1.5 References

  • Alpert, K.B., Tanksley, S.D., 1996, High-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2: a major fruit weight quantitative trait locus in tomato. Proc Natl Acad Sci USA 93: 15503-15507.

    Article  PubMed  CAS  Google Scholar 

  • Botstein, D., Risch, N., 2003, Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease. Nature Genetics 33: 228-237.

    Article  PubMed  CAS  Google Scholar 

  • Buckler, E.S., Thornsberry, J.M., 2002, Plant molecular diversity and applications to genomics. Curr Opin Plant Biol 5: 107-111.

    Article  PubMed  CAS  Google Scholar 

  • Chakraborty, R., Weiss, K.M., 1988, Admixture as a tool for finding genes and detecting that difference from allelic association between loci. Proc Natl Acad Sci 85: 9119-9123.

    Article  PubMed  CAS  Google Scholar 

  • Darvasi, A., Soller, M., 1995, Advanced intercross lines, an experimental population for fine genetic mapping. Genetics 141: 1199-1207.

    PubMed  CAS  Google Scholar 

  • El-Assal, S., Alonso-Blanco, C., Peeters, A., Raz, V., Koornneef, M., 2001, A QTL for flowering time in Arabidopsis reveals a novel allele of CRY2. Nat Genet. 29: 435-440.

    Article  CAS  Google Scholar 

  • Garris, A.J., McCouch, S.R., Kresovich, S., 2003, Population structure and its effect on haplotype diversity and linkage disequilibrium surrounding the xa5 locus of rice (Oryza sativa L.). Genetics 165: 759-769.

    PubMed  Google Scholar 

  • Jannink, J.-L., Walsh, B., 2002, Association mapping in plant populations. In: Kang M.S. (ed.). Quantitative Genetics, Genomics and Plant Breeding, CABI, Wallingford, UK.

    Google Scholar 

  • Johanson, U., West, J., Lister, C., Michaels, S., Amasino, R., Dean, C., 2000, Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time. Science 290: 344-347.

    Article  PubMed  CAS  Google Scholar 

  • Kruglyak, L., 1999, Prospects for whole-genome linkage disequilibrium mapping of common disease genes. Nat Genet 22: 139-144.

    Article  PubMed  CAS  Google Scholar 

  • Neale, D.B., Savolainen, O., 2004, Association genetics of complex traits in conifers. Trends Plant Sci 9(7): 325-330.

    Article  PubMed  CAS  Google Scholar 

  • Paran, I., Zamir, D., 2003, Quantitative traits in plants: beyond the QTL. Trends Genet 19: 303-306.

    Article  PubMed  CAS  Google Scholar 

  • Rafalski, A., Morgante, M., 2004, Corn and humans: recombination and linkage disequilibrium in two genomes of similar size. Trends Genet 20(2): 103-111.

    Article  PubMed  CAS  Google Scholar 

  • Remington, D.L., Thornsberry, J.M., Matsuoka, Y., Wilson, L.M., Whitt, S.R., Doebley, J., Kresovich, S., Goodman, M.M., Buckler, E.S., 2001, Structure of linkage disequilibrium and phenotypic associations in maize genome. PNAS 98(20): 11479-11484.

    Article  PubMed  CAS  Google Scholar 

  • Risch, N.J., 2000, Searching for genetic determinants in the new millennium. Nature 405: 847-856.

    Article  PubMed  CAS  Google Scholar 

  • Sharbel, T.F., Haubold, B., Mitchell-Olds, T., 2000, Genetic isolation by distance in Arabidopsis thaliana: Biogeography and postglacial colonization of Europe. Molecular Ecology 9:2109-2118.

    Article  PubMed  CAS  Google Scholar 

  • Stuber, C.W., Polacco, M., Senior, M.L., 1999, Synergy of empirical breeding, marker-assisted selection, and genomics to increase crop yield potential. Crop Sci 39: 1571-1583.

    Article  Google Scholar 

  • The International HapMap Consortium, 2005, A haplotype map of the human genome. Nature 437: 1299-1320.

    Article  CAS  Google Scholar 

  • Yano, M., 2001, Genetic and molecular dissection of naturally occurring variation. Curr Opin Plant Biol 4: 130-135.

    Article  PubMed  CAS  Google Scholar 

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Oraguzie, N.C., Wilcox, P.L. (2007). An Overview of Association Mapping. In: Oraguzie, N.C., Rikkerink, E.H.A., Gardiner, S.E., De Silva, H.N. (eds) Association Mapping in Plants. Springer, New York, NY. https://doi.org/10.1007/978-0-387-36011-9_1

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