Abstract
Useful models for resonance energy transfer (RET) are reviewed for several geometries relevant tomembranes (planar, bilayer, multilayer) and uniform donor and acceptor probe distribution. Extensions fornon-uniform distribution of fluorophores are presented and discussed. Selected examples of quantitativeapplications of RET to these systems are described. It is illustrated how information about lipid phaseseparation (phase composition, domain size, partition coefficients, kinetics of lipid demixing) lipid–peptide(domain induction/membrane aggregation), lipid–protein (lipid selectivity in the annular region) andlipid–DNA (lipoplex structural characterization) interactions can be recovered from time-resolvedRET data.
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References
Lakowicz JR (1999) Principles of fluorescence spectroscopy, 2nd edn. Plenum, New York
Förster T (1949) Experimentelle und theoretische Untersuchung des Zwischenmolekularen übergangs von Elektrinenanregungsenergie. Z Naturforsch 4a:321–327
Dale RE, Eisinger J, Blumberg WE (1979) The orientational freedom of molecular probes. The orientation factor in intramolecular energy transfer. Biophys J 26:161–193
Stryer L (1978) Fluorescence energy transfer as a spectroscopic ruler. Ann Rev Biochem 47:829–846
Loura LMS, Prieto M (2000) Resonance energy transfer in heterogeneous planar and bilayer systems: theory and simulation. J Phys Chem B 104:6911–6919
Tweet AG, Bellamy WD, Gaines GL Jr (1964) Fluorescence quenching and energy transfer in monomolecular films containing chlorophyll. J Chem Phys 41:2068–2077
Wolber PK, Hudson BS (1979) An analytical solution to the Förster energy transfer problem in two dimensions. Biophys J 28:197–210
Davenport L, Dale RE, Bisby RH, Cundall RB (1985) Transverse location of the fluorescent probe 1,6-diphenyl-1,3,5-hexatriene in model lipid bilayer membrane systems by resonance energy transfer. Biochemistry 24:4097–4108
Berberan-Santos MN, Valeur B (1991) Fluorescence depolarization by electronic energy transfer in donor–acceptor pairs of like and unlike chromophores. J Chem Phys 95:8048–8055
Runnels LW, Scarlata SF (1995) Theory and application of fluorescence homotransfer in melittin oligomerization. Biophys J 69:1569–1583
Kawski A (1983) Excitation energy transfer and its manifestation in isotropic media. Photochem Photobiol 4:487–508
Van de Meer BW, Coker G III, Chen S-YS (1994) Resonance energy transfer: theory and data. VCH, New York
Snyder B, Freire E (1982) Fluorescence energy transfer in two dimensions. A numeric solution for random and non-random distributions. Biophys J 40:137–148
Medhage B, Mukhtar E, Kalman B, Johansson LB-Å, Molotkovsky JG (1992) Electronic energy transfer in anisotropic systems. Part 5. Rhodamine-lipid derivatives in model membranes. J Chem Soc Faraday Trans 88:2845–2851
Gautier I, Tramier M, Duriex C, Coppey J, Pansu RB, Nicolas J-C, Kemnitz K, Coppey-Moisan M (2001) Homo-FRET microscopy in living cells to measure monomer–dimer transition of GFP-tagged proteins. Biophys J 80:3000–3008
Sharma P, Varma R, Sarasij RC, Ira, Gousset K, Krishnamoorthy G, Rao M, Mayor S (2004) Nanoscale organization of multiple GPI-anchored proteins in living cell membranes. Cell 116:577–589
Farinha JPS, Martinho JMG, Yekta A, Winnik MA (1995) Direct nonradiative energy-transfer in polymer interphases – fluorescence decay functions from concentration profiles generated by Fickian diffusion. Macromolecules 28:6084–6088
Yekta A, Winnik MA, Farinha JPS, Martinho JMG (1997) Dipole–dipole electronic energy transfer. Fluorescence decay functions for arbitrary distributions of donors and acceptors. II. Systems with spherical symmetry. J Phys Chem A 101:1787–1792
Farinha JPS, Spiro JG, Winnik MA (2004) Dipole–dipole electronic energy transfer. Fluorescence decay functions for arbitrary distributions of donors and acceptors. III. Systems with cylindrical symmetry. J Phys Chem B 108:16392–16400
Loura LMS, Fedorov A, Prieto M (2001) Fluid–fluid membrane microheterogeneity: a fluorescence resonance energy transfer study. Biophys J 80:776–788
Ballet PM, Van der Auweraer M, De Schryver FC, Lemmetyinen H, Vourimaa E (1996) Global analysis of the fluorescence decays of N,N′-dioctadecyl rhodamine B in Langmuir–Blodgett films of diacyl phosphatidic acids. J Phys Chem 100:13701–13715
Liu YS, Li L, Ni S, Winnik M (1993) Recovery of acceptor concentration distribution in a direct energy transfer experiment. Chem Phys 177:579–589
Shaklai N, Yguerabide J, Ranney HM (1977) Interaction of haemoglobin with red blood cell membranes as shown by a fluorescent chromophore. Biochemistry 16:5585–5592
Yguerabide J (1994) Theory for establishing proximity relations in biological membranes by excitation energy transfer measurements. Biophys J 66:683–693
Gutierrez-Merino C (1981) Quantitation of the Förster energy transfer for two-dimensional systems. I. Lateral phase separation in unilamellar vesicles formed by binary phospholipids mixtures. Biophys Chem 14:247–257
Gutierrez-Merino C (1981) Quantitation of the Förster energy transfer for two-dimensional systems. II. Protein distribution and aggregation state in biological membranes. Biophys Chem 14:259–266
Gutierrez-Merino C, Munkonge F, Mata AM, East JM, Levinson BL, Napier RM, Lee AG (1987) The position of the ATP binding site on the (Ca2++ Mg2+)-ATPase. Biochim Biophys Acta 897:207–216
Antollini SS, Soto MA, de Romanelli IB, Gutiérrez-Merino C, Sotomayor P, Barrantes FJ (1996) Physical state of bulk and protein-associated lipid in nicotinic acetylcholine receptor-rich membrane studied by laurdan generalized polarization and fluorescence energy transfer. Biophys J 70:1275–1284
Bonini IC, Antollini SS, Gutiérrez-Merino C, Barrantes FJ (2002) Sphingomyelin composition and physical assymetries in native acetylcholine receptor-rich membranes. Eur Biophys J 31:417–427
Fernandes F, Loura LMS, Koehorst R, Spruijt RB, Hemminga MA, Fedorov A, Prieto M (2004) Quantification of protein–lipid selectivity using FRET: Application to the M13 major coat protein. Biophys J 87:344–352
Loura LMS, Fedorov A, Prieto M (1996) Resonance energy transfer in a model system of membranes: application to gel and liquid crystalline phases. Biophys J 71:1823–1836
Loura LMS, Fedorov A, Prieto M (2000) Membrane probe distribution heterogeneity: a resonance energy transfer study. J Phys Chem B 104:6920–6931
Loura LMS, Castanho MARB, Fedorov A, Prieto M (2001) A photophysical study of the polyene antibiotic filipin Self-aggregation and filipin–ergosterol interaction. Biochim Biophys Acta 1510:125–135
Loura LMS, Fedorov A, Prieto M (2000) Partition of membrane probes in a gel/fluid two-component lipid system: a fluorescence resonance energy transfer study. Biochim Biophys Acta 1467:101–112
Mouritsen OG, Bloom M (1984) Mattress model of lipid–protein interactions in membranes. Biophys J 46:141–153
Almeida PFF, Vaz WLC, Thompson TE (1992) Lateral diffusion in the liquid phases of dimyristoylphosphatidylcholine/cholesterol lipid bilayers: a free volume analysis. Biochemistry 31:6739–6747
Loura LMS, Fedorov A, Prieto M (2001) Exclusion of a cholesterol analog from the cholesterol-rich phase in model membranes. Biochim Biophys Acta 1511:236–243
Simons K, Ikonen I (1997) Functional rafts in cell membranes. Nature 387:569–572
Simons K, Toomre D (2000) Lipid rafts and signal transduction. Nat Rev Mol Cell Biol 1:31–39
Anderson RGW, Jacobson K (2002) A role for lipid shells in targeting proteins to caveolae, rafts and other lipid domains. Science 296:1821–1825
de Almeida RFM, Fedorov A, Prieto M (2003) Sphingomyelin/phosphatidylcholine/cholesterol phase diagram: boundaries and composition of lipid rafts. Biophys J 85:2406–2416
de Almeida RFM, Loura LMS, Fedorov A, Prieto M (2005) Lipid rafts have different sizes depending on membrane composition: a time-resolved fluorescence resonance energy transfer study. J Mol Biol 346:1109–1120
Santos NC, Prieto M, Castanho MA (2003) Quantifying molecular partition into model systems of biomembranes: an emphasis on optical spectroscopic methods. Biochim Biophys Acta 1612:123–135
Veiga AS, Santos NC, Loura LMS, Fedorov A, Castanho MARB (2004) HIV fusion inhibitor peptide T-1249 is able to insert or adsorb to lipidic bilayers. Putative correlation with improved efficiency. J Am Chem Soc 126:14758–14763
Stopar D, Spruijt RB, Wolfs CJAM, Hemminga MA (2003) Protein–lipid interactions of bacteriophage M13 major coat protein. Biochim Biophys Acta 1611:5–15
Fernandes F, Loura LM, Prieto M, Koehorst R, Spruijt RB, Hemminga MA (2003) Dependence of M13 major coat protein oligomerization and lateral segregation on bilayer composition. Biophys J 85:2430–2441
Felgner PL, Gadek TR, Holm M, Roman R, Chan HW, Wenz M, Northrop JP, Ringold GM, Danielsen M (1987) Lipofection: a highly efficient, lipid-mediated DNA-transfection procedure. Proc Natl Acad Sci USA 84:7413–7417
Huang L, Hung M-C, Wagner E (eds) (1999) Nonviral vectors for gene therapy. Academic Press, San Diego
Lasic DD, Strey H, Stuart MCA, Podgornik R, Frederik PM (1997) The structure of DNA–liposome complexes. J Am Chem Soc 119:832–833
Radler JO, Koltover I, Salditt T, Safinya CR (1997) Structure of DNA–cationic liposome complexes: DNA intercalation in multilamellar membranes in distinct interhelical packing regimes. Science 275:810–814
Madeira C, Loura LM, Aires-Barros MR, Fedorov A, Prieto M (2003) Characterization of DNA/lipid complexes by fluorescence resonance energy transfer. Biophys J 85:3106–3119
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Loura, L.M., Prieto, M. (2007). Resonance Energy Transfer in Biophysics: Formalisms and Application to Membrane Model Systems. In: Berberan-Santos, M.N. (eds) Fluorescence of Supermolecules, Polymers, and Nanosystems. Springer Series on Fluorescence, vol 4. Springer, Berlin, Heidelberg. https://doi.org/10.1007/4243_2007_016
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DOI: https://doi.org/10.1007/4243_2007_016
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