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Modeling and quantification of protein maps by Gaussian fitting

  • Biomedical Applications
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Computer Analysis of Images and Patterns (CAIP 1993)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 719))

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Abstract

We present a fitting method applied to high resolution two-dimensional polyacrylamide gel electrophoresis (2D-PAGE). The goal of this technique is to improve protein quantification by 2D-PAGE modeling. Two-dimensional gaussian functions (2D-Gaussian) have been used to model protein patterns contained in a 2D-PAGE. The patterns are sequentially approximated by a 2D-Gaussian. This is performed, first, by a least square fitting algorithm (linear method); then, by a conjugate gradient minimization algorithm (non-linear method). Results of this method are discussed.

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Dmitry Chetverikov Walter G. Kropatsch

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© 1993 Springer-Verlag Berlin Heidelberg

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Vargas, J.R., Appel, R.D., Hochstrasser, D.F., Pellegrini, C. (1993). Modeling and quantification of protein maps by Gaussian fitting. In: Chetverikov, D., Kropatsch, W.G. (eds) Computer Analysis of Images and Patterns. CAIP 1993. Lecture Notes in Computer Science, vol 719. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-57233-3_84

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  • DOI: https://doi.org/10.1007/3-540-57233-3_84

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  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-57233-6

  • Online ISBN: 978-3-540-47980-2

  • eBook Packages: Springer Book Archive

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