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An Analysis for Proving Temporal Properties of Biological Systems

  • Roberta Gori
  • Francesca Levi
Part of the Lecture Notes in Computer Science book series (LNCS, volume 4279)

Abstract

This paper concerns the application of formal methods to biological systems, modeled specifically in BioAmbients [34], a variant of the Mobile Ambients [4] calculus. Following the semantic-based approach of abstract interpretation, we define a new static analysis that computes an abstract transition system. Our analysis has two main advantages with respect to the analyses appearing in literature: (i) it is able to address temporal properties which are more general than invariant properties; (ii) it supports, by means of a particular labeling discipline, the validation of systems where several copies of an ambient may appear.

Keywords

Model Check Abstract State Temporal Property Abstract Interpretation Reachability Analysis 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Springer-Verlag Berlin Heidelberg 2006

Authors and Affiliations

  • Roberta Gori
    • 1
  • Francesca Levi
    • 1
  1. 1.Department of Computer ScienceUniversity of PisaItaly

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