Ciliate Bio-operations on Finite String Multisets

  • Jürgen Dassow
  • György Vaszil
Conference paper
Part of the Lecture Notes in Computer Science book series (LNCS, volume 4036)


We study properties of string operations motivated by the gene assembly process of ciliates. We examine the effect of these operations applied to finite multisets of words which make it possible to study not only sequential, but also different types of parallel derivation strategies. We compare the classes of finite languages which can be obtained by the different strategies, and show that although the string operations we consider are reversible, their parallel application can produce effects resembling the irreversibility of the biological process of gene assembly in ciliates.


Sequential Mode Gene Assembly Derivation Step Language Class Parallel Derivation 
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Copyright information

© Springer-Verlag Berlin Heidelberg 2006

Authors and Affiliations

  • Jürgen Dassow
    • 1
  • György Vaszil
    • 2
  1. 1.Fakultät für InformatikOtto-von-Guericke-Universität MagdeburgMagdeburgGermany
  2. 2.Computer and Automation Research InstituteHungarian Academy of SciencesBudapestHungary

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