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A 2-Approximation Algorithm for Sorting by Prefix Reversals

  • Johannes Fischer
  • Simon W. Ginzinger
Part of the Lecture Notes in Computer Science book series (LNCS, volume 3669)

Abstract

Sorting by Prefix Reversals, also known as Pancake Flipping, is the problem of transforming a given permutation into the identity permutation, where the only allowed operations are reversals of a prefix of the permutation. The problem complexity is still unknown, and no algorithm with an approximation ratio better than 3 is known. We present the first polynomial-time 2-approximation algorithm to solve this problem. Empirical tests suggest that the average performance is in fact better than 2.

Keywords

Approximation Ratio Identity Permutation Blue Edge Breakpoint Graph Reversal Distance 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Springer-Verlag Berlin Heidelberg 2005

Authors and Affiliations

  • Johannes Fischer
    • 1
  • Simon W. Ginzinger
    • 1
  1. 1.LFE Bioinformatik und Praktische InformatikLudwig-Maximilians-Universität MünchenMünchen

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