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Abstract

Indigenous resources of the Asian pig population are less defined and only rarely compared with European breeds. In this study, five indigenous pig breeds from Viet Nam (Mong Cai, Muong Khuong, Co, Meo, Tap Na), two exotic breeds kept in Viet Nam (Large White, Landrace), three European commercial breeds (Pietrain, Landrace, Large White), and European Wild Boar were chosen for evaluation and comparison of genetic diversity. Samples and data from 317 animals were collected and ten polymorphic microsatellite loci were selected according to the recommendations of the FAO Domestic Animal Diversity Information System (DAD-IS; http://www.fao.org/dad-is/). Effective number of alleles, Polymorphism Information Content (PIC), withinbreed diversity, estimated heterozygosities and tests for Hardy-Weinberg equilibrium were determined. Breed differentiation was evaluated using the fixation indices of Wright (1951). Genetic distances between breeds were estimated according to Nei (1972) and used for the construction of UPGMA dendrograms which were evaluated by bootstrapping. Heterozygosity was higher in indigenous Vietnamese breeds than in the other breeds. The Vietnamese indigenous breeds also showed higher genetic diversity than the European breeds and all genetic distances had a strong bootstrap support. The European commercial breeds, in contrast, were closely related and bootstrapping values for genetic distances among them were below 60%. European Wild Boar displayed closer relation with commercial breeds of European origin than with the native breeds from Viet Nam. This study is one of the first to contribute to a genetic characterization of autochthonous Vietnamese pig breeds and it clearly demonstrates that these breeds harbour a rich reservoir of genetic diversity.

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References

  • Blott, S., Andersson, L., Groenen, M.A., SanCristobal, M., Chevalet, C., Cardellino, R., Li, Huang, Li, K., Plastow, G. & Haley, C. 2003. Characterization of genetic variation in the pig breeds of China and Europe — The PIGBIODIV2 Project. Archivos de Zootecnia, 52: 207–213.

    Google Scholar 

  • Botstein, D., White, R.L., Skolnick, M. & Davis, R.W. 1980. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. American Journal of Human Genetics, 32: 314–331.

    PubMed  CAS  ISI  Google Scholar 

  • Fan, B., Wang, Z.G., Li, Y.J., Zhao, X.L., Liu, B., Zhao, S.H., Yu, M., Li, M.H., Chen, S.L., Xiong, T.A. & Li, K. 2002. Genetic variation analysis within and among Chinese indigenous swine populations using microsatellite markers. Animal Genetics, 33: 422–427.

    Article  PubMed  CAS  ISI  Google Scholar 

  • FAO [Food and Agriculture Organization of the United Nations]. 2000. World Watch List for Domestic Animal Diversity. 2nd edition. Edited by B.D. Scherf. Rome: FAO.

    Google Scholar 

  • Felsenstein, J. 1991. PHYLIP, Version 3.57c. Distributed by the author. Department of Genetics, University of Washington, Seattle WA, USA

    Google Scholar 

  • Hartl, D.A. & Clark, A.G. 1997. Principles of Population Genetics. Sunderland, MA: Sinauer Associates Inc.

    Google Scholar 

  • Kim, K.I., Lee, J.H., Li, K., Zhang, Y.P., Lee, S.S., Gongora, J. & Moran, C. 2002. Phylogenetic relationships of Asian and European pig breeds determined by mitochondrial DNA D-loop sequence polymorphism. Animal Genetics, 33: 19–25.

    PubMed  CAS  ISI  Google Scholar 

  • Kimura, M. & Crow, J.F. 1964. The number of alleles that can be maintained in a finite population. Genetics, 49: 725–738.

    PubMed  CAS  ISI  Google Scholar 

  • Laval, G., Iannuccelli, N., Legault, L., Milan, D., Groenen, M.A., Giuffra, E., Andersson, L., Nissen, P.H., Jorgensen, C.B., Beeckmann, P., Geldermann, H., Foulley, J.-L., Chevalet, C. & Ollivier, L. 2000. Genetic diversity of eleven European pig breeds. Genetics Selection Evolution, 32: 187–203.

    Article  CAS  ISI  Google Scholar 

  • Lemus-Flores, C., Ulloa-Arvizu, R., Ramos-Kuri, M., Estrada, F.J. & Alonso, R.A. 2001. Genetic analysis of Mexican hairless pig populations. Journal of Animal Science, 79: 3021–3026.

    PubMed  CAS  ISI  Google Scholar 

  • Li, K., Chen, Y., Moran, C., Fan, B., Zhao, S. & Peng, Z. 2000. Analysis of diversity and genetic relationships between four Chinese indigenous pig breeds and one Australian commercial pig breed. Animal Genetics, 31: 322–325.

    PubMed  CAS  ISI  Google Scholar 

  • Makova, K.D., Nekrutenko, A. & Baker, R.J. 2000. Evolution of microsatellite alleles in four species of mice (genus Apodemus). Journal of Molecular Evolution, 51: 166–172.

    PubMed  CAS  ISI  Google Scholar 

  • Nei, M. 1972 Genetic distance between populations. American Naturalist, 106: 283–292.

    Google Scholar 

  • Neigel, J.E. 2002. Is FST obsolete? Conservation Genetics, 3: 167–173.

    Article  CAS  ISI  Google Scholar 

  • Nicholas, K.B., Nicholas, H.B. Jr, & Deerfield, D.W., II. 1997. GeneDoc: Analysis and Visualization of Genetic Variation. See:http://www.psc.edu/biomed/genedoc

    Google Scholar 

  • Swofford, D.L. & Selander, R.B. 1989. BIOSYS-2, Version 1.7, Dept. of Genetics and Development, University of Illinois at Urbana Champaign, Urbana, Illinois, USA. 1997 version modified by W.C. Black IV, Dept. of Microbiology, Colorado State University, Fort Collins, Colorado, USA.

    Google Scholar 

  • Wright, S. 1951. The genetical structure of populations. Annals of Eugenics, 15: 323–354.

    Google Scholar 

  • Wright, S. 1978. Evolution and the Genetics of Population, Variability Within and Among Natural Populations. Chicago IL: University of Chicago Press.

    Google Scholar 

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Thuy, N. et al. (2005). Genetic Diversity and Relationships of Vietnamese and European Pig Breeds. In: Makkar, H.P., Viljoen, G.J. (eds) Applications of Gene-Based Technologies for Improving Animal Production and Health in Developing Countries. Springer, Dordrecht. https://doi.org/10.1007/1-4020-3312-5_11

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