Role of Messenger RNA Specific Secondary Structure in the Control of Gene Expression

  • Sylvain Blanquet
  • Guy Fayat
  • Jean-François Mayaux
  • Mathias Springer
  • Marianne Grunberg-Manago
Conference paper

Abstract

Prokaryotic messenger RNA can form specific secondary structures involved in transcription termination. These structures can be located within as well as at the end of an operon. In the case of several aminoacid biosynthetic operons, termination sites are found between the promoter and the structural part of the operon. Regulation of operon expression can be achieved by controlling transcription termination versus read-through at these termination sites. The control involves the coupling of RNA translation to the transcription process. The present review summarizes the evidence in favour of the same kind of control mechanism in the expression of E.coli phenylalanyl-tRNA synthetase operon.

Keywords

Structural Part Loop Structure Leader Peptide Transcription Termination Transcription Terminator 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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References

  1. 1.
    Doty, P., Boedtker, H., Fresco, J.R., Haselkorn, R. and Litt, M.: 1959, Proc. Natl. Acad. Sci. USA, 45, pp.482–486.CrossRefGoogle Scholar
  2. 2.
    Rich, A. and Rajbhandary, U.L.: 1976, Ann.Rev.Biochem.45, pp.805–860.CrossRefGoogle Scholar
  3. 3.
    Stiegler, P., Carbon, P., Ebel, J.P. and Ehresmann, C.: 1981, Eur.J.Biochem.120, pp. 487–495.CrossRefGoogle Scholar
  4. Branlant, C., Knol, A., Machatt, M.A., Pouyet, J., Ebel, J.P., Edwards, K. and Kössel, H.: 1981, Nucleic Acids Res.9, pp.4303–4324.CrossRefGoogle Scholar
  5. 4.
    Volkin, E. and Astrachan, L.: 1956, Virology 2, pp.149–161.CrossRefGoogle Scholar
  6. 5.
    Gros, F., Gilbert, W., Hiatt, H.H., Kurland, C.G., Risebrough, R.W. and Watson, J.D.: 1961, Nature 190, pp.581–585.CrossRefGoogle Scholar
  7. 6.
    Lodish, H.F.: 1970, J.Mol.Biol. 50, pp.689–702.CrossRefGoogle Scholar
  8. 7.
    Steitz, J.A.: 1969, Nature 224, pp.957–964.CrossRefGoogle Scholar
  9. 8.
    Fiers, W., Contreras, R., Duerunck, S., Haegeman, G., Iserentant, D., Mereegaert, J., Min-Jou, W., Molemans, S., Raeymaekers, A., Van den Berghe, A., Volckaert, G., Ysebaert, M.: 1976, Nature 260, pp.500–507.CrossRefGoogle Scholar
  10. 9.
    Hall, M.N., Gabay, J., Debarbouillé, M. and Schwartz, M.: 1982, Nature 295, pp.616–618.CrossRefGoogle Scholar
  11. 10.
    Shine, J. and Dalgarno, L.:1974, Proc. Natl. Acad. Sci. USA 71, pp. 1342–1346.CrossRefGoogle Scholar
  12. 11.
    Saito, H. and Richardson, C.C.: 1981, Cell 27, pp.533–542.CrossRefGoogle Scholar
  13. 12.
    Gegenheimer, P. and Apirion, D.: 1981, Microbiol.Rev.45, pp. 502–541.Google Scholar
  14. 13.
    Rosenberg, M. and Court, D.: 1979, Ann.Rev.Genet.13, pp. 319–353.CrossRefGoogle Scholar
  15. 14.
    Adhya, S. and Gottesman, M.: 1978, Ann.Rev.Biochem.47, pp. 967–996.CrossRefGoogle Scholar
  16. 15.
    Yanofsky, C.: 1981, Nature 289, pp. 751–758.CrossRefGoogle Scholar
  17. 16.
    Ward, D. F. and Gottesman, M.E.: 1982, Science 216, pp. 946–951.CrossRefGoogle Scholar
  18. 17.
    Kasai, T.: 1974, Nature 249, pp. 523–527.CrossRefGoogle Scholar
  19. 18.
    Bertrand, K., Korn, L.J., Lee, F., Yanofsky, C.: 1977, J.Mol.Biol. 117, pp. 227–247.CrossRefGoogle Scholar
  20. 19.
    Stroynowsky, I. and Yanofsky, C.: 1982, Nature 298, pp. 34–38.CrossRefGoogle Scholar
  21. 20.
    Stroynowsky, I., Van Cleemput, M. and Yanofsky, C.: 1982, Nature 298, pp. 38–41.CrossRefGoogle Scholar
  22. 21.
    Johnston, H.M., Barnes, W.M., Chumley, F.G., Bossi, L. and Roth, J.: 1980, Proc.Natl.Acad.Sci.USA 77, pp.508–512.CrossRefGoogle Scholar
  23. 22.
    Gardner, J.F.: 1979, Proc.Natl.Acad.Sci.USA 76, pp.1706–1710.CrossRefGoogle Scholar
  24. 23.
    Lawther, R.P. and Hatfield, G.W.: 1980, Proc.Natl.Acad.Sci.USA 77, pp.1862–1866.CrossRefGoogle Scholar
  25. 24.
    Nargang, F.E., Subrahmanyam, C.S. and Umbarger, H.E.: 1980, Proc.Natl.Acad.Sci.USA 77, pp.1823–1827.CrossRefGoogle Scholar
  26. 25.
    Keller, E.B. and Calvo, J.M.: 1979, Proc.Natl.Acad.Sci.USA 76, pp.6186–6190.CrossRefGoogle Scholar
  27. 26.
    Zurawski, G., Gunsalus, R.P., Brown, K.D. and Yanofsky, C.: 1981, J.Mol.Biol. 145, pp.47–73.CrossRefGoogle Scholar
  28. 27.
    Gowrishankar, J. and Pittard, J.: 1982, J.Bacteriol.150, pp.1130–1137Google Scholar
  29. 28.
    Schimmel, P.R. and Soll, D.: 1979, Annu.Rev.Biochem.48, pp.601–648.CrossRefGoogle Scholar
  30. 29.
    Neidhardt, F.C., Parker, J. and Mc Keever, W.: 1975, Ann.Rev.Microbiol. 29, pp.215–250.CrossRefGoogle Scholar
  31. 30.
    Morgan, S.D. and Soil, D.: 1978, Progr.Nucl.Acid.Res. and Molec.Biol.21, pp.181–207.CrossRefGoogle Scholar
  32. 31.
    Nass, G. and Neidhardt, F.C.: 1967, Biochim.Biophys.Acta 134, pp.347–359Google Scholar
  33. 32.
    Neidhardt, F.C., Bloch, P.L., Pedersen, S. and Reeh, S.: 1977, J. Bacteriol. 129, pp.378–387.Google Scholar
  34. 33.
    Putney, S.D. and Schimmel, P.: 1981, Nature 291, pp.632–635.CrossRefGoogle Scholar
  35. 34.
    Hall, C.V. and Yanofsky, C.: 1981, J.Bacteriol.148, pp.941–949.Google Scholar
  36. 35.
    Fayat, G., Blanquet, S., Dessen, P., Batelier, G. and Waller, J.P.: 1974 Biochimie 56, pp.35–41.CrossRefGoogle Scholar
  37. 36.
    Springer, M., Graffe, M. and Hennecke, H.: 1977, Proc.Natl.Acad.Sci.USA 74, pp.3970–3974.CrossRefGoogle Scholar
  38. 37.
    Hennecke, H., Springer, M. and Böck, A.: 1977, Molec.Gen.Genet. 152, pp.205–210.CrossRefGoogle Scholar
  39. 38.
    Hennecke, H., Böck, A., Thomale, J. and Nass, G.: 1977, J. Bacteriol. 131, pp.943–950.Google Scholar
  40. 39.
    Plumbridge, J.A., Springer, M., Graffe, M., Goursot, R. and Grunberg-Manago, M.: 1980, Gene 11, pp.33–42.CrossRefGoogle Scholar
  41. 40.
    Springer, M., Plumbridge, J.A., Trudel, M., Graffe, M. and Grunberg-Manago, M.: 1982, Molec.Gen.Genet.186, pp.247–252.CrossRefGoogle Scholar
  42. 41.
    Plumbridge, J.A. and Springer, M.: 1980, J.Mol.Biol. 144, pp.595–600.CrossRefGoogle Scholar
  43. 42.
    Springer, M., Plumbridge, J.A., Trudel, M., Grunberg-Manago, M., Fayat, G., Mayaux, J.F., Sacerdot, C., Dessen, P., Fromant, M. and Blanquet, S.: 1982, in Translational/Transcriptional Regulation of Gene Expression (Grunberg-Manago, M. and Safer, B., eds) Elsevier, in press.Google Scholar
  44. 43.
    Plumbridge, J.A. and Springer, M.: 1982, J.Bacteriol., in press.Google Scholar
  45. 44.
    Springer, M., Graffe, M. and Grunberg-Manago, M.: 1979, Molec.Gen.Genet.169, pp.337–343.CrossRefGoogle Scholar
  46. 45.
    Plumbridge, J.A. and Springer, M.: 1982, J.Bacteriol., in press.Google Scholar
  47. 46.
    Trudel, M.: 1982, Thèse de Doctorat de l’Université Paris VI.Google Scholar
  48. 47.
    Casabadan, M.J. and Cohen, S.N.: 1980, J.Mol.Biol. 138, pp.179–207.CrossRefGoogle Scholar
  49. 48.
    Hilton, J.L., Kearney, P.C. and Ames, B.N.: 1965, Arch.Biochem.Biophys.112, pp.544–547.CrossRefGoogle Scholar
  50. 49.
    Sacerdot, C., Fayat, G., Dessen, P., Springer, M., Plumbridge, J.A., Grunberg-Manago, M. and Blanquet, S.: 1982, EMBO J.1, pp.311–315.Google Scholar
  51. 50.
    Pribnow, D.: 1975, Proc.Natl.Acad.Sci.USA 72, pp.784–789.CrossRefGoogle Scholar
  52. 51.
    Lee, F. and Yanofsky, C.: 1977, Proc.Natl.Acad.Sci.USA 74, pp.4365–4369.CrossRefGoogle Scholar

Copyright information

© D. Reidel Publishing Company 1983

Authors and Affiliations

  • Sylvain Blanquet
    • 1
    • 2
  • Guy Fayat
    • 1
    • 2
  • Jean-François Mayaux
    • 1
    • 2
  • Mathias Springer
    • 1
    • 2
  • Marianne Grunberg-Manago
    • 1
    • 2
  1. 1.Laboratoire de BiochimieEcole PolytechniquePalaiseau CedexFrance
  2. 2.Institut de Biologie Physico-ChimiqueParisFrance

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