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Exploitation of Translational Bioinformatics for Decision-Making on Cancer Treatments

  • Jose Antonio Miñarro-Giménez
  • Teddy Miranda-Mena
  • Rodrigo Martínez-Béjar
  • Jesualdo Tomás Fernández-Breis
Part of the Lecture Notes in Computer Science book series (LNCS, volume 6865)

Abstract

The biological information involved in hereditary cancer and medical diagnoses have been rocketed in recent years due to new sequencing techniques. Connecting orthology information to the genes that cause genetic diseases, such as hereditary cancers, may produce fruitful results in translational bioinformatics thanks to the integration of biological and clinical data. Clusters of orthologous genes are sets of genes from different species that can be traced to a common ancestor, so they share biological information and therefore, they might have similar biomedical meaning and function.

Linking such information to medical decision support systems would permit physicians to access relevant genetic information, which is becoming of paramount importance for medical treatments and research. Thus, we present the integration of a commercial system for decision-making based on cancer treatment guidelines, ONCOdata, and a semantic repository about orthology and genetic diseases, OGO. The integration of both systems has allowed the medical users of ONCOdata to make more informed decisions.

Keywords

Ontology Translational bioinformatics Cluster of Orthologs Genetic Diseases 

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Copyright information

© Springer-Verlag Berlin Heidelberg 2011

Authors and Affiliations

  • Jose Antonio Miñarro-Giménez
    • 1
  • Teddy Miranda-Mena
    • 2
  • Rodrigo Martínez-Béjar
    • 1
  • Jesualdo Tomás Fernández-Breis
    • 1
  1. 1.Facultad de InformáticaUniversidad de MurciaMurciaSpain
  2. 2.IMETMurciaSpain

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