Investigation of a Biological Repair Scheme

  • Vincent Danos
  • Jérôme Féret
  • Walter Fontana
  • Russell Harmer
  • Jean Krivine
Part of the Lecture Notes in Computer Science book series (LNCS, volume 5391)

Abstract

This note details an interaction pattern for the allocation of a scarce biological resource where and when it is needed. It is entirely based on a mass action stochastic dynamics. Domain-domain binding plays a crucial role in the design of the pattern which we therefore present using a rule-based approach where binding is an explicit primitive. We also a use a series of refinements, starting from a very simple interaction set, which we feel gives an interesting and intuitive rationale for the working of the final repair scheme.

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Copyright information

© Springer-Verlag Berlin Heidelberg 2009

Authors and Affiliations

  • Vincent Danos
    • 1
  • Jérôme Féret
    • 2
  • Walter Fontana
    • 3
  • Russell Harmer
    • 4
  • Jean Krivine
    • 3
  1. 1.University of EdinburghUK
  2. 2.INRIA, CNRS, École Normale SupérieureFrance
  3. 3.Harvard Medical SchoolUSA
  4. 4.CNRS, Université Paris-DiderotFrance

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