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Attenuation Regulation as a Term Rewriting System

  • Eugene Asarin
  • Thierry Cachat
  • Alexander Seliverstov
  • Tayssir Touili
  • Vassily Lyubetsky
Conference paper
Part of the Lecture Notes in Computer Science book series (LNCS, volume 4545)

Abstract

The classical attenuation regulation of gene expression in bacteria is considered. We propose to represent the secondary RNA structure in the leader region of a gene or an operon by a term, and we give a probabilistic term rewriting system modeling the whole process of such a regulation.

Keywords

Markov Chain Leader Region Probabilistic Term Ground Term Tree Transducer 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Springer-Verlag Berlin Heidelberg 2007

Authors and Affiliations

  • Eugene Asarin
    • 1
  • Thierry Cachat
    • 1
  • Alexander Seliverstov
    • 2
  • Tayssir Touili
    • 1
  • Vassily Lyubetsky
    • 2
  1. 1.LIAFA, CNRS and University Paris Diderot 
  2. 2.IITP, Russian Academy of Science 

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