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Biochemical Reactions as Computations

  • Andrzej Ehrenfeucht
  • Grzegorz Rozenberg
Part of the Lecture Notes in Computer Science book series (LNCS, volume 4497)

Abstract

Two main mechanisms behind the functioning of biochemical reactions are facilitation and inhibition; these mechanisms are also central for the interaction between biochemical reactions. This observation underlies the theory of reaction systems which is a formal framework for the investigation of biochemical reactions, and especially interactions between them.

Keywords

Reaction System Boolean Function Biochemical Reaction Traditional Model Formal Framework 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

References

  1. 1.
    Ehrenfeucht, A., Rozenberg, G.: Basic notions of reaction systems. In: Calude, C.S., Calude, E., Dinneen, M.J. (eds.) DLT 2004. LNCS, vol. 3340, pp. 27–29. Springer, Heidelberg (2004)CrossRefGoogle Scholar
  2. 2.
    Ehrenfeucht, A., Rozenberg, G.: Reaction systems. Fundamenta Informaticae 76, 1–18 (2006)zbMATHGoogle Scholar
  3. 3.
    Ehrenfeucht, A., Rozenberg, G.: Events and modules in reaction systems, Theoretical Computer Science (to appear)Google Scholar

Copyright information

© Springer-Verlag Berlin Heidelberg 2007

Authors and Affiliations

  • Andrzej Ehrenfeucht
    • 1
  • Grzegorz Rozenberg
    • 1
    • 2
  1. 1.Department of Computer Science, University of Colorado at Boulder, Boulder, CO 80309USA
  2. 2.Leiden Institute of Advanced Computer Science, Leiden University, Niels Bohrweg 1, 2333 CA LeidenThe Netherlands

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