Biomimetic in Silico Devices

  • C. Anthony Hunt
  • Glen E. P. Ropella
  • Michael S. Roberts
  • Li Yan
Conference paper

DOI: 10.1007/978-3-540-25974-9_4

Part of the Lecture Notes in Computer Science book series (LNCS, volume 3082)
Cite this paper as:
Hunt C.A., Ropella G.E.P., Roberts M.S., Yan L. (2005) Biomimetic in Silico Devices. In: Danos V., Schachter V. (eds) Computational Methods in Systems Biology. CMSB 2004. Lecture Notes in Computer Science, vol 3082. Springer, Berlin, Heidelberg

Abstract

We introduce biomimetic in silico devices, and means for validation along with methods for testing and refining them. The devices are constructed from adaptable software components designed to map logically to biological components at multiple levels of resolution. In this report we focus on the liver; the goal is to validate components that mimic features of the lobule (the hepatic primary functional unit) and dynamic aspects of liver behavior, structure, and function. An assembly of lobule-mimetic devices represents an in silico liver. We validate against outflow profiles for sucrose administered as a bolus to isolated, perfused rat livers. Acceptable in silico profiles are experimentally indistinguishable from those of the in situ referent. This new technology is intended to provide powerful new tools for challenging our understanding of how biological functional units function in vivo.

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Copyright information

© Springer-Verlag Berlin Heidelberg 2005

Authors and Affiliations

  • C. Anthony Hunt
    • 1
    • 3
  • Glen E. P. Ropella
    • 1
  • Michael S. Roberts
    • 2
  • Li Yan
    • 3
  1. 1.Dept. of Biopharmaceutical Sciences, Biosystems GroupUniversity of CaliforniaSan FranciscoUSA
  2. 2.Department of MedicineUniversity of Queensland, Princess Alexandra HospitalWoolloongabbaAustralia
  3. 3.Joint UCSF/UC Berkeley Bioengineering Graduate ProgramUSA

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