Algorithms for Visualizing Phylogenetic Networks

Conference paper
Part of the Lecture Notes in Computer Science book series (LNCS, volume 9801)

Abstract

We study the problem of visualizing phylogenetic networks, which are extensions of the Tree of Life in biology. We use a space filling visualization method, called DAGmaps, in order to obtain clear visualizations using limited space. In this paper, we restrict our attention to galled trees and galled networks and present linear time algorithms for visualizing them as DAGmaps.

Notes

Acknowledgments

We thank Irini Koutaki-Pantermaki who contributed some ideas in an earlier version of the paper, and Vassilis Tsiaras for useful discussions.

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Copyright information

© Springer International Publishing AG 2016

Authors and Affiliations

  1. 1.Department of Computer ScienceUniversity of CreteHeraklionGreece
  2. 2.Department of Mechanical and Industrial Design EngineeringT.E.I. of West MacedoniaKozaniGreece

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