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A Filter-Based Approach for Approximate Circular Pattern Matching

  • Md. Aashikur Rahman Azim
  • Costas S. Iliopoulos
  • M. Sohel Rahman
  • M. Samiruzzaman
Part of the Lecture Notes in Computer Science book series (LNCS, volume 9096)

Abstract

This paper deals with the Approximate Circular Pattern Matching (ACPM) problem, which appears as an interesting problem in many biological contexts. Here the goal is to find all approximate occurrences of the rotations of a pattern \(\mathcal{P}\) of length m in a text \(\mathcal{T}\) of length n. In this article, we present a filter-based approach to solve the problem. We experimentally compare our approach with the state of the art algorithms in the literature and the results are found to be excellent.

Keywords

Total Distance Circular Pattern Slide Window Approach Approximate Version Linear String 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Springer International Publishing Switzerland 2015

Authors and Affiliations

  • Md. Aashikur Rahman Azim
    • 1
  • Costas S. Iliopoulos
    • 2
  • M. Sohel Rahman
    • 1
    • 2
  • M. Samiruzzaman
    • 2
  1. 1.Department of CSE, AℓEDA GroupBUETDhakaBangladesh
  2. 2.Department of InformaticsKing’s College LondonStrand, LondonUK

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