BactoSim – An Individual-Based Simulation Environment for Bacterial Conjugation
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BactoSim is an agent-based platform for simulating the conjugation in spatially structured bacterial populations, which are the conditions typically found on naturally occurring colonies such as biofilms or in agar-based laboratory cultures. The model provides a set of key indicators which can be visualized in real time as the simulation evolves and saved as for further analysis.
KeywordsBasic Reproduction Number Conjugative Plasmid Mass Action Kinetic Bacterial Conjugation Single Bacterial Cell
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