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Complex Diffusion in Bacteria

  • Christopher H. Bohrer
  • Jie Xiao
Chapter
Part of the Advances in Experimental Medicine and Biology book series (AEMB, volume 1267)

Abstract

Diffusion within bacteria is often thought of as a “simple” random process by which molecules collide and interact with each other. New research however shows that this is far from the truth. Here we shed light on the complexity and importance of diffusion in bacteria, illustrating the similarities and differences of diffusive behaviors of molecules within different compartments of bacterial cells. We first describe common methodologies used to probe diffusion and the associated models and analyses. We then discuss distinct diffusive behaviors of molecules within different bacterial cellular compartments, highlighting the influence of metabolism, size, crowding, charge, binding, and more. We also explicitly discuss where further research and a united understanding of what dictates diffusive behaviors across the different compartments of the cell are required, pointing out new research avenues to pursue.

Keywords

Diffusion Bacteria Crowding Viscoelastic Glass Mean squared displacement Confinement Single particle tracking Anomalous Diffusion Metabolism Charge Velocity autocorrelation function Cell envelope Outer membrane Inner membrane Periplasm. 

Notes

Acknowledgements

We would like to thank Dr. Xinxing Yang and Nicolas Yehya for their comments and feedback.

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Copyright information

© Springer Nature Switzerland AG 2020

Authors and Affiliations

  • Christopher H. Bohrer
    • 1
    • 2
  • Jie Xiao
    • 1
  1. 1.Department of Biophysics and Biophysical ChemistryJohns Hopkins School of MedicineBaltimoreUSA
  2. 2.Department of BiophysicsJohns Hopkins UniversityBaltimoreUSA

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