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Improving Brain Tumor Segmentation with Dilated Pseudo-3D Convolution and Multi-direction Fusion

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MultiMedia Modeling (MMM 2020)

Part of the book series: Lecture Notes in Computer Science ((LNISA,volume 11961))

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Abstract

Convolutional neural networks have shown their dominance in many computer vision tasks and been broadly used for medical image analysis. Unlike traditional image-based tasks, medical data is often in 3D form. 2D Networks designed for images shows poor performance and efficiency on these tasks. Although 3D networks work better, their computation and memory cost are rather high. To solve this problem, we decompose 3D convolution to decouple volumetric information, in the same way human experts treat volume data. Inspired by the concept of three medically-defined planes, we further propose a Multi-direction Fusion (MF) module, using three branches of this factorized 3D convolution in parallel to simultaneously extract features from three different directions and assemble them together. Moreover, we suggest introducing dilated convolution to preserve resolution and enlarge receptive field for segmentation. The network with proposed modules (MFNet) achieves competitive performance with other state-of-the-art methods on BraTS 2018 brain tumor segmentation task and is much more light-weight. We believe this is an effective and efficient way for volume-based medical segmentation.

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Acknowledgements

This work is supported by the National Key Research and Development Program of China (2018YFB0804203), National Defense Science and Technology Fund for Distinguished Young Scholars (2017-JCJQ-ZQ-022), the National Nature Science Foundation of China (61525206, 61771468, 61976008), the Youth Innovation Promotion Association Chinese Academy of Sciences (2017209).

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Liu, S., Xu, H., Liu, Y., Xie, H. (2020). Improving Brain Tumor Segmentation with Dilated Pseudo-3D Convolution and Multi-direction Fusion. In: Ro, Y., et al. MultiMedia Modeling. MMM 2020. Lecture Notes in Computer Science(), vol 11961. Springer, Cham. https://doi.org/10.1007/978-3-030-37731-1_59

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  • DOI: https://doi.org/10.1007/978-3-030-37731-1_59

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