Advances in Microbial Ecology

Volume 11 of the series Advances in Microbial Ecology pp 387-430

The Ecology of Chitin Degradation

  • Graham W. GoodayAffiliated withDepartment of Genetics and Microbiology, Marischal College, University of Aberdeen

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Chitin is the (1→4)-β-linked homopolymer of N-acetyl-D-glucosamine (Fig. 1). The individual polymer chains can be thought of as helices, as each sugar unit is inverted with respect to its neighbors. This leads to their stabilization as rigid ribbons by 03—H … 05 and 06—H … 07 hydrogen bonds. The commonest form of chitin is α-chitin. Its unit cell is of two N,N‵-diacetylchitobiose units of two chains in an antiparallel arrangement. Thus, adjacent polymer chains run in opposite directions, held together by 06—H … 06 hydrogen bonds, and the chains are held in sheets by 07 … H—N hydrogen bonds (Minke and Blackwell, 1978). This gives a statistical mixture of CH2OH orientations, equivalent to half oxygens on each residue, each forming inter- and intramolecular hydrogen bonds. This results in two types of amide groups; all are involved in the interchain C=O … H—N bonds, while half of the groups also serve as acceptors for 06—H … O=C intramolecular bonds. This extensive intermolecular hydrogen bonding leads to a very stable structure, the individual polymer chains eventually giving rise to microfibrils if allowed to crystallize (Gooday, 1983). A less common form of chitin is β-chitin, in which the unit cell is of one N,N‵diacetylchitobiose unit, giving a polymer stabilized as a rigid ribbon, as for α-chitin, by 03—H … 05 intramolecular bonds (Gardner and Blackwell, 1975). Chains are then held together in sheets by C=O … H—N hydrogen bonding of the amide groups and by the CH2OH side chains, forming intersheet hydrogen bonds to the carbonyl oxygens on the next chains (06—H … 07). This gives a structure of parallel poly-N-acetylglucosamine chains with no intersheet hydrogen bonds.