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An Object Oriented Simulation of Real Occurring Molecular Biological Processes for DNA Computing and Its Experimental Verification

  • Thomas Hinze
  • Uwe Hatnik
  • Monika Sturm
Conference paper
Part of the Lecture Notes in Computer Science book series (LNCS, volume 2340)

Abstract

We present a simulation tool for frequently used DNA operations on the molecular level including side effects based on a probabilistic approach. The specification of the considered operations is directly adapted from detailed observations of molecular biological processes in laboratory studies. Bridging the gap between formal models of DNA computing, we use process description methods from biochemistry and show the closeness of the simulation to the reality.

Keywords

Simulation Tool Bonding Rate Molecular Reaction Polymerase Chain Reaction Cycle Star Activity 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Springer-Verlag Berlin Heidelberg 2002

Authors and Affiliations

  • Thomas Hinze
    • 1
  • Uwe Hatnik
    • 2
  • Monika Sturm
    • 1
  1. 1.Institute of Theoretical Computer ScienceDresden University of Technologyi DresdenGermany
  2. 2.Institute of Computer EngineeringDresden University of Technologyi DresdenGermany

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