A Partitioned Approach to Protein Interaction Mapping

  • Yanga Byun
  • Euna Jeong
  • Kyungsook Han
Conference paper
Part of the Lecture Notes in Computer Science book series (LNCS, volume 2528)

Abstract

This is a brief description of a new program for drawing protein interactions in three-dimensional space. Our program divides nodes into three groups: biconnected subgraph in the center, terminal nodes at the outermost region, and the rest in between them. Experimental results show that the program efficiently generates a clear and aesthetically pleasing drawing of large-scale protein interaction networks and that it is an order of magnitude faster than other force-directed layouts.

Copyright information

© Springer-Verlag Berlin Heidelberg 2002

Authors and Affiliations

  • Yanga Byun
    • 1
  • Euna Jeong
    • 1
  • Kyungsook Han
    • 1
  1. 1.Department of Computer Science and EngineeringInha UniversityInchonSouth Korea

Personalised recommendations