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Computational Grid-Based 3-tier ART1 Data Mining for Bioinformatics Applications

  • Kyu Cheol Cho
  • Da Hye Park
  • Jong Sik Lee
Conference paper
Part of the Lecture Notes in Computer Science book series (LNCS, volume 4223)

Abstract

Computational Grid technology has been noticed as an issue to solve large-scale bioinformatics-related problems and improves data accuracy and processing speed on multiple computation platforms with distributed bioDATA sets. This paper focuses on a GPCR data mining processing which is an important bioinformatics application. This paper proposes a Grid-based 3-tier ART1 classifier which operates an ART1 clustering data mining using grid computational resources with distributed GPCR data sets. This Grid-based 3-tier ART1 classifier is able to process a large-scale bioinformatics application in guaranteeing high bioDATA accuracy with reasonable processing resources. This paper evaluates performance of the Grid-based ART1 classifier in comparing to the ART1-based classifier and the ART1 optimum classifier. The data mining processing time of the Grid-based ART1 classifier is 18% data mining processing time of the ART1 optimum classifier and is the 12% data mining processing time of the ART1-based classifier. And we evaluate performance of the Grid-based 3-tier ART1 classifier in comparing to the Grid-based ART1 classifier. As data sets become larger, data mining processing time of the Grid-based 3-tier ART1 classifier more decrease than that of the Grid-based ART1 classifier. Computational Grid in bioinformatics applications gives a great promise of high performance processing with large-scale and geographically distributed bioDATA sets.

Keywords

Data Mining Grid Resource Grid Environment Adaptive Resonance Theory ART1 Classifier 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Springer-Verlag Berlin Heidelberg 2006

Authors and Affiliations

  • Kyu Cheol Cho
    • 1
  • Da Hye Park
    • 1
  • Jong Sik Lee
    • 1
  1. 1.School of Computer Science and EngineeringInha UniversityIncheonSouth Korea

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