Abstract
One of the major technological advances in biological research was the invention and development of the transmission electron microscope, which enables high resolution and high magnification studies of cross-sections of specimens. As such, it has proved to be a useful tool to describe ultrastructural features of taxonomic and phylogenetic importance in modern organisms. Here we discuss how to extend the use of transmission electron microscopy (TEM) to the fossil record, with emphasis on acritarchs (organic-walled microfossils of unknown affinity). Microfossils are traditionally studied by use of transmitted light microscopy, a method that reveals details of external morphology only. TEM however, gives an additional level of detail and reveals structures that can greatly aid in interpretation of taxonomic affinity, and thus can reveal further detail on the origination and diversification of myriad eukaryotic groups in the fossil record. In this chapter we describe the preparation procedure, show advantages and shortcomings of the technique, and discuss how to interpret the results from a geobiological perspective.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Allard B, Templier J (2000) Comparison of neutral lipid profile of various trilaminar outer cell wall (TLS)-containing microalgae with emphasis on algaenan occurrence. Phytochemistry 54:369–380
Arouri K, Greenwood PF, Walter MR (1999) A possible chlorophycean affinity of some Neoproterozoic acritarchs. Org Geochem 30:1323–1337
Arouri K, Greenwood PF, Walter MR (2000) Biological affinities of Neoproterozoic acritarchs from Australia: microscopic and chemical characterisation. Org Geochem 31:75–89
Barghoorn ES, Tyler SA (1965) Microorganisms from the Gunflint Chert. Science 147:563–577
Bozzola JJ, Russel LD (1999) Electron microscopy: principles and techniques for biologists, 2nd edn. Jones & Bartlett, Sudbury, 670 pp
Brasier MD, Green OR, Jephcoat AP, Kleppe AT, Van Kranendonk MJ, Lindsay JF, Steele A, Grassineau NV (2002) Questioning the evidence for Earth’s oldest fossils. Nature 416:76–81
Buckland-Nicks J, Hodgson A (2000) Fertilization in Callochiton castaneus (Mollusca). Biol Bull 199:59–67
Cáceres CE (1997) Dormancy in invertebrates. Invert Biol 116:371–383
Cohen PA, Knoll AH, Kodner RB (2009) Large spinose microfossils in Ediacaran rocks as resting stages of early animals. PNAS 106:6519–6524
Couch K, Downes M, Burns C (2001) Morphological differences between subitaneous and diapause eggs of Boeckella triarticulata (Copepoda: Calanoida). Freshw Biol 46:925–933
Damiani MC, Leonardi PI, Pieroni OI, Caceres EJ (2006) Ultrastructure of the cyst wall of Haematococcus pluvialis (Chlorophyceae): wall development and behaviour during cyst germination. Phycologia 45:616–623
De Gregorio BT, Sharp TG, Flynn GJ, Wirick S, Hervig RL (2009) Biogenic origin for Earth’s oldest putative microfossils. Geology 37:631–634
Egerton RF (2005) Physical principles of electron microscopy. An introduction to TEM, SEM, and AEM. Springer, New York, 202 pp
Evitt WR (1963) A discussion and proposals concerning fossil dinoflagellates, hystrichospheres, and acritarchs. Proc Natl Acad Sci USA 49(158–164):298–302
Grauvogel-Stamm L, Guignard G, Wellman CH (eds) (2009) Spore/pollen fine structure in living and fossil plants. Rev Palaeobot Palynol 156:1–262
Grey K, Willman S (2009) Taphonomy of Ediacaran (late Neoproterozoic) acritarchs: significance for taxonomy and biostratigraphy. Palaios 24:239–256
Hagen C, Siegmund S, Braune W (2002) Ultrastructural and chemical changes in the cell wall of Haematococcus pluvialis (Volvocales, Chlorophyta) during aplanospore formation. Eur J Phycol 37:217–226
Hill R, Shepard W (1997) Observations on the identification of California anostracan cysts. Hydrobiologia 359:113–123
Inouye I, Hori T, Moestrup Ø (2003) Ultrastructural studies on Cymbomonas tetramitiformis (Prasinophyceae). I. General structure, scale microstructure, and ontogeny. Can J Bot 81:657–671
Javaux EJ, Marshal CP (2006) A new approach in deciphering early protist palaeobiology and evolution: combined microscopy and microchemistry of single Proterozoic acritarchs. Rev Palaeobot Palynol 139:1–15
Javaux EJ, Knoll AH, Walter MR (2001) Morphological and ecological complexity in early eukaryotic ecosystems. Nature 412:66–69
Javaux EJ, Knoll AH, Walter MR (2003) Recognizing and interpreting the fossils of early eukaryotes. Orig Life Evol Biosph 33:75–94
Javaux EJ, Knoll AH, Walter MR (2004) TEM evidence for eukaryotic diversity in mid-Proterozoic oceans. Geobiology 2:121–132
Javaux EJ, Marshall CP, Bekker A (2010) Organic-walled microfossils in 3.2-billion-year-old shallow-marine siliciclastic deposits. Nature 463:934–938
Jones TP, Rowe NP (eds) (1999) Fossil plants and spores – modern techniques. Geological Society Publishing House, Bath
Jux U (1968) Über den Feinbau der Wandung bei Tasmanites Newton. Palaeontogr Abt B 124:112–124
Jux U (1969a) Über den Feinbau der Zystenwandung von Pachysphaera marshalliae Parke, 1966. Palaeontogr Abt B 125:104–111
Jux U (1969b) Über den Feinbau der Zystenwandung von Halosphaera Schmitz, 1878. Palaeontogr Abt B 128:48–55
Jux U (1971) Über den Feinbau der Wandungen einiger paläozischer Baltisphaeidiacean. Palaeontogr Abt B 136:115–128
Jux U (1977) Über die wandstrukturen sphaeromorpher acritarchen: Tasmanites Newton, Tapajonites Sommer & Van Boekel, Chuaria Walcott. Palaeontogr Abt B 160:1–16
Kempe A, Wirth R, Altermann W, Stark RW, Schopf JW, Heckl WM (2005) Focussed ion beam preparation and in situ nanoscopic study of Precambrian acritarchs. Precambrian Res 140:35–54
Kennaway GE, Eaton GL, Feist-Burkhardt S (2008) A detailed protocol for the preparation and orientation of single fossil dinoflagellate cysts for transmission electron microscopy. Palynology 32:1–15
Kjellström G (1968) Remarks on the chemistry and ultrastructure of the cell wall of some Palaeozoic leiospheres. Geol Fören Stockh Förh 90:118–221
Knoll M (1935) Aufladepotentiel und Sekundäremission elektronenbestrahlter Körper. Z techische Phys 16:467–475
Knoll AH, Javaux EJ, Hewitt D, Cohen P (2006) Eukaryotic organisms in Proterozoic oceans. Philos Trans R Soc B 631:1023–1038
Marshall CP, Javaux EJ, Knoll AH, Walter MR (2005) Combined micro-Fourier transform infrared (FTIR) spectroscopy and micro-Raman spectroscopy of Proterozoic acritarchs: a new approach to Palaeobiology. Precambrian Res 138:208–224
Marshall CP, Carter EA, Leuko S, Javaux EJ (2006) Vibrational spectroscopy of extant and fossil microbes: relevance for the astrobiological exploration of Mars. Vib Spectrosc 41:182–189
Martin F, Kjellström G (1973) Ultrastructural study of some Ordovician acritarchs from Gotland, Sweden. Neues Jahrbuch für Geologie und Paläontologie Monatshefte 1:44–54
McMullan D (1995) Scanning electron microscopy 1928–1965. Scanning 17:175–185
Moczydłowska M, Willman S (2009) Ultrastructure of cell walls in ancient microfossils as a proxy to their biological affinities. Precambrian Res 173:27–38
Moczydłowska M, Schopf JW, Willman S (2010) Micro- and nano-scale ultrastructure of cell walls in Cryogenian microfossils: revealing their biological affinity. Lethaia 43:130–136
Moreau JW, Sharp TG (2004) A transmission electron microscopy study of silica and kerogen biosignatures in 1.9 Ga Gunflint microfossils. Astrobiology 4:196–210
Onoue Y, Toda T, Ban S (2004) Morphological features and hatching patterns of eggs in Acartia steueri (Crustacea, Copepoda) from Sagami Bay, Japan. Hydrobiologia 511:17–24
Peat CJ (1981) Comparative light microscopy, scanning electron microscopy and transmission electron microscopy of selected organic walled microfossils. J Microsc 122:287–294
Peng Y, Bao H, Yuan X (2009) New morphological observations for Paleoproterozoic acritarchs from the Chuanlinggou Formation, North China. Precambrian Res 168:223–232
Reimer L, Kohl H (2008) Transmission electron microscopy. Physics of image formation, 5th edn. Springer, New York, 590 pp
Schiffbauer JD, Xiao S (2009) Novel application of focused ion beam electron microscopy (FIB-EM) in preparation and analysis of microfossil ultrastructures: a new view of complexity in early eukaryotic organisms. Palaios 24:616–626
Schopf JW (1993) Microfossils of the early Archean Apex chert: new evidence of the antiquity of life. Science 260:640–646
Schopf JW, Kudryavtsev AB, Agresti DG, Wdowiak TJ, Czaja AD (2002) Laser-Raman imagery of Earth’s earliest fossils. Nature 416:73–76
Talyzina NM, Moczydłowska M (2000) Morphological and ultrastructural studies of some acritarchs from the Lower Cambrian Lükati Formation, Estonia. Rev Palaeobot Palynol 112:1–21
van Waveren IM, Marcus NH (1993) Morphology of recent copepod egg envelopes from Turkey Point, Gulf of Mexico, and their implications for acritarch affinity. Spec Pap Palaeontol 48:111–124
Wall D (1962) Evidence from recent plankton regarding the biological affinities of Tasmanites Newton 1875 and Leiosphaeridia Eisenack 1958. Geol Mag 99:353–362
Wellman CH, Grauvogel Stamm L, Guignard G (2009) Studies of spore/pollen wall ultrastructure in fossil and living plants: a review of the subject are and the contribution of Bernard Lugardon. Rev Palaeobot Palynol 156:2–6
Williams DB, Carter CB (2009) Transmission electron microscopy: a textbook for materials science, 2nd edn. Springer, New York, 760 pp
Willman S (2009) Morphology and wall ultrastructure of leiosphaeric and acanthomorphic acritarchs from the Ediacaran of Australia. Geobiology 7:8–20
Willman S, Moczydłowska M (2007) Wall ultrastructure of an Ediacaran acritarch from the Officer Basin, Australia. Lethaia 40:111–123
Acknowledgments
Gary Wife, Anette Axén and Stefan Gunnarsson at the Microscopy and Imaging unit at EBC, Uppsala University, are thanked for their expertise regarding preparing and sectioning the samples and microscope work. Margaret Coughling at the Harvard Medical School provided help and inspiration to PAC in developing a new preparation method and provided help and advice with microtoming.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2011 Springer Netherlands
About this chapter
Cite this chapter
Willman, S., Cohen, P.A. (2011). Ultrastructural Approaches to the Microfossil Record: Assessing Biological Affinities by Use of Transmission Electron Microscopy. In: Laflamme, M., Schiffbauer, J., Dornbos, S. (eds) Quantifying the Evolution of Early Life. Topics in Geobiology, vol 36. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-0680-4_12
Download citation
DOI: https://doi.org/10.1007/978-94-007-0680-4_12
Published:
Publisher Name: Springer, Dordrecht
Print ISBN: 978-94-007-0679-8
Online ISBN: 978-94-007-0680-4
eBook Packages: Earth and Environmental ScienceEarth and Environmental Science (R0)