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The Tomato Genome pp 217–243Cite as

Synteny Among Solanaceae Genomes

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Part of the book series: Compendium of Plant Genomes ((CPG))

Abstract

The Solanaceae was among the first plant families to be analyzed via comparative mapping and thus was a pioneer in the realm of synteny studies. Analyses of chromosome content and organization have employed a range of techniques, including linkage mapping of genes and molecular markers, physical mapping via fluorescence in situ hybridization, and sequencing of relatively small genomic segments as well as the complete sequencing of the tomato genome. Early comparisons in the family involved tomato and its close relative potato and have extended outward to include eggplant, pepper, tobacco, and petunia. Not surprisingly, the degree of synteny among these species is a function of the time since their divergence, with inversion, translocation, and transposition being the chief mechanisms of chromosome rearrangement. The results of this work provide important insight into the modes and tempo of plant genome evolution while serving a practical purpose as well: knowledge of genome synteny and colinearity makes it easier to leverage resources from one species to another in this agronomically important family.

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Acknowledgments

We are grateful to The Scientific and Technological Research Council of Turkey (Project No. 104T224) for support of our work in eggplant.

Author information

Authors and Affiliations

  1. Department of Biological Sciences, Mount Holyoke College, South Hadley, MA, 01075, USA

    Amy Frary

  2. Department of Molecular Biology & Genetics, Izmir Institute of Technology, Urla, Izmir, 35430, Turkey

    Sami Doganlar & Anne Frary

Authors
  1. Amy Frary
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  2. Sami Doganlar
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  3. Anne Frary
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Corresponding author

Correspondence to Anne Frary .

Editor information

Editors and Affiliations

  1. GAFL, INRA, Montfavet Cedex, France

    Mathilde Causse

  2. Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, New York, USA

    Jim Giovannoni

  3. INRA-INP Toulouse, Castanet Tolosan, France

    Mondher Bouzayen

  4. INRA-INP Toulouse, Castanet Tolosan, France

    Mohamed Zouine

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© 2016 Springer-Verlag Berlin Heidelberg

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Frary, A., Doganlar, S., Frary, A. (2016). Synteny Among Solanaceae Genomes. In: Causse, M., Giovannoni, J., Bouzayen, M., Zouine, M. (eds) The Tomato Genome. Compendium of Plant Genomes. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-53389-5_12

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