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Attenuation Regulation as a Term Rewriting System

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Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 4545))

Abstract

The classical attenuation regulation of gene expression in bacteria is considered. We propose to represent the secondary RNA structure in the leader region of a gene or an operon by a term, and we give a probabilistic term rewriting system modeling the whole process of such a regulation.

The support of CNRS-RAS cooperation agreement 19122 Evolver is gratefully acknowledged.

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Hirokazu Anai Katsuhisa Horimoto Temur Kutsia

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© 2007 Springer-Verlag Berlin Heidelberg

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Asarin, E., Cachat, T., Seliverstov, A., Touili, T., Lyubetsky, V. (2007). Attenuation Regulation as a Term Rewriting System. In: Anai, H., Horimoto, K., Kutsia, T. (eds) Algebraic Biology. AB 2007. Lecture Notes in Computer Science, vol 4545. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-73433-8_7

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  • DOI: https://doi.org/10.1007/978-3-540-73433-8_7

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-73432-1

  • Online ISBN: 978-3-540-73433-8

  • eBook Packages: Computer ScienceComputer Science (R0)

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