Abstract
The notion of entropy is shared between statistics and thermodynamics, and is fundamental to both disciplines. This makes statistical problems particularly suitable for reaction network implementations. In this paper we show how to perform a statistical operation known as Information Projection or E projection with stochastic mass-action kinetics. Our scheme encodes desired conditional distributions as the equilibrium distributions of reaction systems. To our knowledge this is a first scheme to exploit the inherent stochasticity of reaction networks for information processing. We apply this to the problem of an artificial cell trying to infer its environment from partial observations.
Keywords
- Partial Observation
- Reaction Network
- Receptor Activation Events
- Ligand Species
- Bayesian Posterior Distribution
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.
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Acknowledgements
Work of Abhishek Behera was supported in part by Bharti Centre for Communication in IIT Bombay.
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Virinchi, M.V., Behera, A., Gopalkrishnan, M. (2017). A Stochastic Molecular Scheme for an Artificial Cell to Infer Its Environment from Partial Observations. In: Brijder, R., Qian, L. (eds) DNA Computing and Molecular Programming. DNA 2017. Lecture Notes in Computer Science(), vol 10467. Springer, Cham. https://doi.org/10.1007/978-3-319-66799-7_6
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DOI: https://doi.org/10.1007/978-3-319-66799-7_6
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