Abstract
We use anisotropic diffusion processes to generalize normal distributions to manifolds and to construct a framework for likelihood estimation of template and covariance structure from manifold valued data. The procedure avoids the linearization that arise when first estimating a mean or template before performing PCA in the tangent space of the mean. We derive flow equations for the most probable paths reaching sampled data points, and we use the paths that are generally not geodesics for estimating the likelihood of the model. In contrast to existing template estimation approaches, accounting for anisotropy thus results in an algorithm that is not based on geodesic distances. To illustrate the effect of anisotropy and to point to further applications, we present experiments with anisotropic distributions on both the sphere and finite dimensional LDDMM manifolds arising in the landmark matching problem.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Notes
- 1.
We use the notation \(\tilde{p}(x_t)\) for path densities and p(y) for point densities.
- 2.
If M has more structure, e.g. being a Lie group or a homogeneous space, additional equivalent ways of defining Brownian motion and heat semi-groups exist.
- 3.
In both cases, the representation is not unique because different matrices W/frames \(X_\alpha \) can lead to the same diffusion. Instead, the MLE can be specified by the symmetric positive matrix \(\varSigma =WW^T\) or, in the manifold situation, be considered an element of the bundle of symmetric positive covariant 2-tensors.
References
Andersson, L., Driver, B.K.: Finite dimensional approximations to wiener measure and path integral formulas on manifolds. J. Funct. Anal. 165(2), 430–498 (1999)
Fletcher, P., Lu, C., Pizer, S., Joshi, S.: Principal geodesic analysis for the study of nonlinear statistics of shape. IEEE Trans. Med. Imaging 23(8), 995–1005 (2004)
Fujita, T., Kotani, S.I.: The Onsager-Machlup function for diffusion processes. J. Math. Kyoto Univ. 22(1), 115–130 (1982)
Hsu, E.P.: Stochastic Analysis on Manifolds. American Mathematical Society, Providence (2002)
Huckemann, S., Hotz, T., Munk, A.: Intrinsic shape analysis: geodesic PCA for Riemannian manifolds modulo isometric Lie group actions. Statistica Sin. 20, 1–100 (2010)
Joshi, S., Davis, B., Jomier, B.M., B, G.G.: Unbiased diffeomorphic atlas construction for computational anatomy. NeuroImage 23, 151–160 (2004)
Joshi, S., Miller, M.: Landmark matching via large deformation diffeomorphisms. IEEE Trans. Image Process. 9(8), 1357–1370 (2000)
Kendall, D.G.: Shape manifolds, procrustean metrics, and complex projective spaces. Bull. Lond. Math. Soc. 16(2), 81–121 (1984)
Micheli, M.: The differential geometry of landmark shape manifolds: metrics, geodesics, and curvature. Ph.D. thesis, Brown University, Providence, USA (2008)
Michor, P.W.: Topics in Differential Geometry. American Mathematical Society, Providence (2008)
Michor, P.W., Mumford, D.: Riemannian geometries on spaces of plane curves. J. Eur. Math. Soc. 8, 1–48 (2004)
Mok, K.P.: On the differential geometry of frame bundles of Riemannian manifolds. J. Fur Die Reine Angew. Math. 1978(302), 16–31 (1978)
Nye, T.: Construction of distributions on Tree-Space via diffusion processes. Mathematisches Forschungsinstitut Oberwolfach (2014). http://www.mfo.de/document/1440a/preliminary_OWR_2014_44.pdf
Pennec, X.: Intrinsic statistics on Riemannian manifolds: basic tools for geometric measurements. J. Math. imaging Vis. 25(1), 127–154 (2006)
Siddiqi, K., Pizer, S.: Medial Representations: Mathematics, Algorithms and Applications. Computational Imaging and Vision, 1st edn. Springer, Heidelberg (2008)
Sommer, S.: Horizontal dimensionality reduction and iterated frame bundle development. In: Nielsen, F., Barbaresco, F. (eds.) GSI 2013. LNCS, vol. 8085, pp. 76–83. Springer, Heidelberg (2013)
Sommer, S.: Diffusion processes and PCA on manifolds. Mathematisches Forschungsinstitut Oberwolfach (2014). http://www.mfo.de/document/1440a/preliminary_OWR_2014_44.pdf
Sommer, S., Lauze, F., Hauberg, S., Nielsen, M.: Manifold valued statistics, exact principal geodesic analysis and the effect of linear approximations. In: Daniilidis, K., Maragos, P., Paragios, N. (eds.) ECCV 2010, Part VI. LNCS, vol. 6316, pp. 43–56. Springer, Heidelberg (2010)
Strichartz, R.S.: Sub-Riemannian geometry. J. Differ. Geom. 24(2), 221–263 (1986). http://projecteuclid.org/euclid.jdg/1214440436
Tipping, M.E., Bishop, C.M.: Probabilistic principal component analysis. J. Roy. Stat. Soc. B 61(3), 611–622 (1999)
Vaillant, M., Miller, M., Younes, L., Trouv, A.: Statistics on diffeomorphisms via tangent space representations. NeuroImage 23(Supplement 1), S161–S169 (2004)
Vialard, F.-X., Risser, L.: Spatially-varying metric learning for diffeomorphic image registration: a variational framework. In: Golland, P., Hata, N., Barillot, C., Hornegger, J., Howe, R. (eds.) MICCAI 2014, Part I. LNCS, vol. 8673, pp. 227–234. Springer, Heidelberg (2014)
Younes, L.: Shapes and Diffeomorphisms. Springer, Heidelberg (2010)
Zhang, M., Fletcher, P.: Probabilistic principal geodesic analysis. In: NIPS, pp. 1178–1186 (2013)
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer International Publishing Switzerland
About this paper
Cite this paper
Sommer, S. (2015). Anisotropic Distributions on Manifolds: Template Estimation and Most Probable Paths. In: Ourselin, S., Alexander, D., Westin, CF., Cardoso, M. (eds) Information Processing in Medical Imaging. IPMI 2015. Lecture Notes in Computer Science(), vol 9123. Springer, Cham. https://doi.org/10.1007/978-3-319-19992-4_15
Download citation
DOI: https://doi.org/10.1007/978-3-319-19992-4_15
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-19991-7
Online ISBN: 978-3-319-19992-4
eBook Packages: Computer ScienceComputer Science (R0)