Abstract
Bacterial inoculants are bacterial species that are applied directly or indirectly to enhance the growth and yield of plants. The application of bacterial inoculants is largely due to their compatibility and complementarity with natural processes of nutrient cycling, plant protection and other related biological processes in agroecosystems. As a nature-based solution, bacterial inoculants are able to drive many beneficial biological processes in agroecosystems with little or no negative impacts. However, their applications have been limited by factors such as awareness, production quality and quantity, storage and compatibility. Although there are studies that are already investigating many of these challenges, the future prospects of the application of bacterial inoculants will be determined by the adoption of new technologies that include multi-omics approach for improving the quality as well as applicability of these beneficial microorganisms.
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References
Adeleke RA (2014) Getting rid of the unwanted: highlights of developments and challenges of biobeneficiation of iron ore minerals – a review. J Ind Microbiol Biotechnol 41(12):1731–1741
Adeleke R, Cloete T, Bertrand A, Khasa D (2010) Mobilisation of potassium and phosphorus from iron ore by ectomycorrhizal fungi. World J Microbiol Biotechnol 26(10):1901–1913
Adeleke R, Cloete T, Khasa D (2012) Culturable microorganisms associated with Sishen iron ore and their potential roles in biobeneficiation. World J Microbiol Biotechnol 28(3):1057–1070
Adeleke R, Nwangburuka C, Oboirien B (2017) Origins, roles and fate of organic acids in soils: a review. S Afr J Bot 108:393–406
Ahemad M, Khan M (2010) Phosphate solubilizing Enterobacter asburiae strain PS2. Afr J Microbiol Res 5:849–857
Ahemad M, Khan MS (2011) Effects of insecticides on plant-growth-promoting activities of phosphate solubilizing rhizobacterium Klebsiella sp. strain PS19. Pestic Biochem Physiol 100(1):51–56
Ahemad M, Kibret M (2014) Mechanisms and applications of plant growth promoting rhizobacteria: current perspective. JKSUS 26(1):1–20
Ahmad F, Ahmad I, Khan MS (2005) Indole acetic acid production by the indigenous isolates of Azotobacter and fluorescent Pseudomonas in the presence and absence of tryptophan. Turk J Biol 29(1):29–34
Ahmad F, Ahmad I, Khan M (2008) Screening of free-living rhizospheric bacteria for their multiple plant growth promoting activities. Microbiol Res 163(2):173–181
Ahmed HF, El-Araby MM (2012) Evaluation of the influence of nitrogen fixing, phosphate solubilizing and potash mobilizing biofertilizers on growth, yield, and fatty acid constituents of oil in peanut and sunflower. Afr J Biotechnol 11(43):10079–10088
Ahmed E, Holmström SJ (2014) Siderophores in environmental research: roles and applications. Microb Biotechnol 7(3):196–208
Akgül D, Mirik M (2008) Biocontrol of Phytophthora capsici on pepper plants by Bacillus megaterium strains. J Plant Pathol 90(1):29–34
Alori ET, Glick BR, Babalola OO (2017) Microbial phosphorus solubilization and its potential for use in sustainable agriculture. Front Microbiol 8:971
Altomare C, Norvell W, Björkman T, Harman G (1999) Solubilization of phosphates and micronutrients by the plant-growth-promoting and biocontrol fungus Trichoderma harzianum Rifai 1295-22. Appl Environ Microbiol 65(7):2926–2933
Ambrosini A, de Souza R, Passaglia L (2015) Ecological role of bacterial inoculants and their potential impact on soil microbial diversity. Plant Soil 400(1–2):193–207
Andrews JH, Harris RF (2000) The ecology and biogeography of microorganisms on plant surfaces. Annu Rev Phytopathol 38(1):145–180
Antoun H, Beauchamp CJ, Goussard N, Chabot R, Lalande R (1998) Potential of Rhizobium and Bradyrhizobium species as plant growth promoting rhizobacteria on non-legumes: effect on radishes (Raphanus sativus L.). Plant Soil 204(1):57–67
Arora NK, Khare E, Maheshwari DK (2010) Plant growth promoting rhizobacteria: constraints in bioformulation, commercialization, and future strategies. In: Maheshwari DK (ed) Plant growth and health promoting bacteria. Microbiology monographs, vol 18, pp 97–116
Aseri G, Jain N, Panwar J, Rao A, Meghwal P (2008) Biofertilizers improve plant growth, fruit yield, nutrition, metabolism and rhizosphere enzyme activities of pomegranate (Punica granatum L.) in Indian Thar Desert. Sci Hortic 117(2):130–135
Barea J, Navarro E, Montoya E (1976) Production of plant growth regulators by rhizosphere phosphate-solubilizing bacteria. J Appl Bacteriol 40(2):129–134
Bashan Y (1998) Inoculants of plant growth-promoting bacteria for use in agriculture. Biotechnol Adv 16(4):729–770
Bello-Akinosho M, Adeleke R, Swanevelder D, Thantsha M (2015) Draft genome sequence of Pseudomonas sp. strain 10-1B, a polycyclic aromatic hydrocarbon degrader in contaminated soil. Genome Announc 3(3):e00325-00315
Bello-Akinosho M, Makofane R, Adeleke R, Thantsha M, Pillay M, Chirima G (2016) Potential of polycyclic aromatic hydrocarbon-degrading bacterial isolates to contribute to soil fertility. Biomed Res Int 2016:1–10
Bello-Akinosho M, Adeleke R, Thantsha MS, Maila M (2017a) Pseudomonas sp.(strain 10–1B): a potential inoculum candidate for green and sustainable remediation. Remediat J (3):75–79
Beneduzi A, Ambrosini A, Passaglia LM (2012) Plant growth-promoting rhizobacteria (PGPR): their potential as antagonists and biocontrol agents. Genet Mol Biol 35(4):1044–1051
Berraho E, Lesueur D, Diem HG, Sasson A (1997) Iron requirement and siderophore production in Rhizobium ciceri during growth on an iron-deficient medium. World J Microbiol Biotechnol 13(5):501–510
Bhattacharjee R, Dey U (2014) Biofertilizer, a way towards organic agriculture: a review. Afr J Microbiol Res 8(24):2332–2343
Bhattacharyya P, Jha D (2012) Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture. World J Microbiol Biotechnol 28(4):1327–1350
Bloem JF, Trytsman G, Smith HJ (2009) Biological nitrogen fixation in resource-poor agriculture in South Africa. Symbiosis 48(1):18–24
Boonkerd N (1998) Symbiotic association between Frankia and actinorhizal plants. In: Malik KA, Mirza MS, Ladha JK (eds) Nitrogen fixation with non-legumes. Developments in plant and soil sciences, vol 79. Springer, Dordrecht
Braun V, Hantke K (2011) Recent insights into iron import by bacteria. Curr Opin Chem Bio 15:328–334
Callaham D, Deltredici P, Torrey JG (1978) Isolation and cultivation in vitro of the actinomycete causing root nodulation in Comptonia. Science 199(4331):899–902
Catroux G, Hartmann A, Revellin C (2001) Trends in rhizobial inoculant production and use. Plant Soil 230(1):21–30
Chaiharn M, Lumyong S (2011) Screening and optimization of indole-3-acetic acid production and phosphate solubilization from rhizobacteria aimed at improving plant growth. Curr Microbiol 62(1):173–181
Chianu JN, Nkonya EM, Mairura F, Chianu JN, Akinnifesi F (2010) Biological nitrogen fixation and socioeconomic factors for legume production in sub-Saharan Africa: a review. Agron Sustain Dev 31:139
Chianu JN, Chianu JN, Mairura F (2012) Mineral fertilizers in the farming systems of sub-Saharan Africa. A review. Agron Sustain Dev 32(2):545–566
Chorom M, Sharifi H, Motamedi H (2010) Bioremediation of a crude oil-polluted soil by application of fertilizers. Iranian J Environ Health Sci Eng 7(4):319
Chung H, Park M, Madhaiyan M, Seshadri S, Song J, Cho H, Sa T (2005) Isolation and characterization of phosphate solubilizing bacteria from the rhizosphere of crop plants of Korea. Soil Biol Biochem 37(10):1970–1974
Cordell D, Drangert J-O, White S (2009) The story of phosphorus: global food security and food for thought. Glob Environ Chang 19(2):292–305
Cruz-Martínez K, Suttle KB, Brodie EL, Power ME, Andersen GL, Banfield JF (2009) Despite strong seasonal responses, soil microbial consortia are more resilient to long-term changes in rainfall than overlying grassland. ISME J 3(6):738
Dastager SG, Deepa C, Pandey A (2011) Potential plant growth-promoting activity of Serratia nematodiphila NII-0928 on black pepper (Piper nigrum L.). World J Microbiol Biotechnol 27(2):259–265
Dent D, Cocking E (2017) Establishing symbiotic nitrogen fixation in cereals and other non-legume crops: the greener nitrogen revolution. Agric Food Secur 6(1):7
Duarah I, Deka M, Saikia N, Boruah HD (2011) Phosphate solubilizers enhance NPK fertilizer use efficiency in rice and legume cultivation. 3 Biotech 1(4):227–238
Duval BD, Hungate BA (2008) Soil science: scavenging for scrap metal. Nat Geosci 1(4):213
Egamberdiyeva D (2007) The effect of plant growth promoting bacteria on growth and nutrient uptake of maize in two different soils. Appl Soil Ecol 36(2–3):184–189
El-Kabbany S (1999) Evaluation of four biofertilizer for bioremediation of pesticide contaminated soil. Proceedings of the international conference on hazardous waste sources, effects and management. Paper presented at the The First Conference of the Central Agricultural Pesticide Lab, Egypt, p 1555
Elkan G (1992) Biological nitrogen fixation systems in tropical ecosystems: an overview. In: Biological nitrogen fixation and sustainability of tropical agriculture. Wiley, Chichester, pp 27–40
Esitken A, Yildiz HE, Ercisli S, Donmez MF, Turan M, Gunes A (2010) Effects of plant growth promoting bacteria (PGPB) on yield, growth and nutrient contents of organically grown strawberry. Sci Hortic 124(1):62–66
Figueiredo MDVB, Seldin L, De Araujo FF, Mariano RDLR (2010) Plant growth promoting rhizobacteria: fundamentals and applications. In: Maheshwari D (ed) Plant growth and health promoting bacteria. Microbiology monographs, vol 18. Springer, Berlin, pp 21–43
Fukushima T, Allred BE, Sia AK, Nichiporuk R, Andersen UN, Raymond KN (2013) Gram-positive siderophore-shuttle with iron-exchange from Fe-siderophore to apo-siderophore by Bacillus cereus YxeB. Proc Natl Acad Sci USA 110:13821–13826
Fulchieri M, Lucangeli C, Bottini R (1993) Inoculation with Azospirillum lipoferum affects growth and gibberellin status of corn seedling roots. Plant Cell Physiol 34(8):1305–1309
Fulekar M, Sharma J, Tendulkar A (2012) Bioremediation of heavy metals using biostimulation in laboratory bioreactor. Environ Monit Assess 184(12):7299–7307
García-Fraile P, Menéndez E, Rivas R (2015) Role of bacterial biofertilizers in agriculture and forestry. AIMS Bioeng 2(3):183–205
Geetha S, Joshi SJ (2013) Engineering rhizobial bioinoculants: a strategy to improve iron nutrition. Sci World J 2013:1–15
Ghosh PK, Kumar De T, Maiti TK (2015) Production and metabolism of indole acetic acid in root nodules and symbiont (Rhizobium undicola) isolated from root nodule of aquatic medicinal legume Neptunia oleracea Lour. J Bot 2015:575067
Glick BR (2014) Bacteria with ACC deaminase can promote plant growth and help to feed the world. Microbiol Res 169(1):30–39
Goldstein A, Krishnaraj P (2007) Phosphate solubilizing microorganisms vs. phosphate mobilizing microorganisms: what separates a phenotype from a trait? In: Velázquez E, Rodríguez-Barrueco C (eds) First International Meeting on Microbial Phosphate Solubilization. Developments in plant and soil sciences, vol 102. Springer, Dordrecht, pp 203–213
Graham PH, Vance CP (2003) Legumes: importance and constraints to greater use. Plant Physiol 131(3):872–877
Guinness P, Walpole B (2012) Environmental systems and societies for the IB Diploma. Cambridge University Press, Cambridge
Gupta RP, Kalia A, Kapoor S (2007) Bioinoculants: a step towards sustainable agriculture. New India Publishing, Pitam Pura, New Delhi, pp V, 306
Gupta G, Panwar J, Akhtar MS, Jha PN (2012) Endophytic nitrogen-fixing bacteria as biofertilizer. In: Lichtfouse E (ed) Sustainable agriculture reviews, vol 11. Springer, Dordrecht
Gupta P, Ravi I, Sharma V (2013) Induction of β-1, 3-glucanase and chitinase activity in the defense response of Eruca sativa plants against the fungal pathogen Alternaria brassicicola. J Plant Interact 8(2):155–161
Gururani MA, Upadhyaya CP, Baskar V, Venkatesh J, Nookaraju A, Park SW (2013) Plant growth-promoting rhizobacteria enhance abiotic stress tolerance in Solanum tuberosum through inducing changes in the expression of ROS-scavenging enzymes and improved photosynthetic performance. J Plant Growth Regul 32(2):245–258
Han HS, Lee KD (2005) Phosphate and potassium solubilizing bacteria effect on mineral uptake, soil availability and growth of eggplant. Res J Agric Biol Sci 1(2):176–180
Han HS, Lee KD (2006) Effect of co-inoculation with phosphate and potassium solubilizing bacteria on mineral uptake and growth of pepper and cucumber. Plant Soil Environ 52(3):130–136
Hassen AI, Bopape F, Sanger L (2016) Microbial inoculants as agents of growth promotion and abiotic stress tolerance in plants. In: Singh D, Singh H, Prabha R (eds) Microbial inoculants in sustainable agricultural productivity, vol 1. Springer, New Delhi, pp 23–36
Hayat R, Ali S, Amara U, Khalid R, Ahmed I (2010) Soil beneficial bacteria and their role in plant growth promotion: a review. Ann Microbiol 60(4):579–598
Hermary H (2007) Effects of some synthetic fertilizers on the soil ecosystem. pp 1–6
Herridge D, Gemell G, Hartley E (2002) Legume inoculants and quality control. Australian Centre for International Agricultural Research Proceedings 109c, pp 105–115
Herrmann L, Lesueur D (2013) Challenges of formulation and quality of biofertilizers for successful inoculation. Appl Microbiol Biotechnol 97(20):8859–8873
Herrmann L, Atieno M, Brau L, Lesueur D (2015) Microbial quality of commercial inoculants to increase BNF and nutrient use efficiency. In: De Bruijn Frans J (ed) Biological nitrogen fixation, vol 2. Wiley, Hoboken, pp 1031–1040
Huang X-F, Chaparro JM, Reardon KF, Zhang R, Shen Q, Vivanco JM (2014) Rhizosphere interactions: root exudates, microbes, and microbial communities 1. Botany 92(4):267–275
Hutchens E, Valsami-Jones E, Mceldowney S, Gaze W, Mclean J (2003) The role of heterotrophic bacteria in feldspar dissolution–an experimental approach. Mineralog Mag 67(6):1157–1170
Insam H, Seewald MS (2010) Volatile organic compounds (VOCs) in soils. Biol Fertil Soils 46(3):199–213
Jain P, Khichi DS (2014) Phosphate solubilizing microorganism (PSM): an eco-friendly biofertilizer and pollution manager. J Dyn Agric Res 1(4):23–28
James E (2000) Nitrogen fixation in endophytic and associative symbiosis. Field Crops Res 65(2–3):197–209
Jenkins T, Jenkins V (2005) The future of phosphorus in agriculture and the environment. The 1st International Congress of Ecologists, University of Business Studies, Banja Luka, Bosnia and Herzegovina, pp 1481–1497
Jiang C-y, Sheng X-f, Qian M, Wang Q-y (2008) Isolation and characterization of a heavy metal-resistant Burkholderia sp. from heavy metal-contaminated paddy field soil and its potential in promoting plant growth and heavy metal accumulation in metal-polluted soil. Chemosphere 72(2):157–164
Jiao H, Luo J, Zhang Y, Xu S, Bai Z, Huang Z (2015) Bioremediation of petroleum hydrocarbon contaminated soil by Rhodobacter sphaeroides biofertilizer and plants. Pak J Pharm Sci 28(5):1881–1886
Johri BN, Sharma A, Virdi J (2003) Rhizobacterial diversity in India and its influence on soil and plant health. Adv Biochem Eng Biotechnol 84:49–89
Karadeniz A, Topcuoğlu Ş, Inan S (2006) Auxin, gibberellin, cytokinin and abscisic acid production in some bacteria. World J Microbiol Biotechnol 22(10):1061–1064
Kaushal M, Wani SP (2016) Plant-growth-promoting rhizobacteria: drought stress alleviators to ameliorate crop production in drylands. Ann Microbiol 66(1):35–42
Kempel A, Brandl R, Schädler M (2009) Symbiotic soil microorganisms as players in aboveground plant-herbivore interactions-the role of rhizobia. Oikos 118(4):634–640
Khan MZA (2014) Microbiological solution to environmental problems – a review on bioremediation. Int J Pure App Biosci 2(6):295–303
Khan AL, Halo BA, Elyassi A, Ali S, Al-Hosni K, Hussain J, Al-Harrasi A, Lee I-J (2016a) Indole acetic acid and ACC deaminase from endophytic bacteria improves the growth of Solanum lycopersicum. Electron J Biotechnol 21:58–64
Khan Z, Rho H, Firrincieli A, Hung SH, Luna V, Masciarelli O, Doty SL (2016b) Growth enhancement and drought tolerance of hybrid poplar upon inoculation with endophyte consortia. Curr Plant Biol 6:38–47
Klotz MG, Stein LY (2008) Nitrifier genomics and evolution of the nitrogen cycle. FEMS Microbiol Lett 278(2):146–156
Kox MA, Jetten MS (2015) The nitrogen cycle principles of plant-microbe interactions. In: Lugtenberg B (ed) Principles of plant-microbe interactions. Springer International Publishing, Berlin, pp 205–214
Krasilinikov N (1957) On the role of soil micro-organism in plant nutrition. Microbiologiya 26:659–672
Kumar H, Bajpai VK, Dubey R, Maheshwari D, Kang SC (2010) Wilt disease management and enhancement of growth and yield of Cajanus cajan (L) var. Manak by bacterial combinations amended with chemical fertilizer. Crop Prot 29(6):591–598
Kumar A, Biswas T, Singh N, Lal E (2014) Effect of Gibberellic acid on growth, quality and yield of tomato (Lycopersicon esculentum Mill.). J Agric Vet Sci 7(4):28–30
Lesueur D, Deaker R, Herrmann L, Bräu L, Jansa J (2016) The production and potential of biofertilizers to improve crop yields. In: Arora N, Mehnaz S, Balestrini R (eds) Bioformulations: for sustainable agriculture. Springer, New Delhi, pp 71–92
Lichtfouse E, Navarrete M, Debaeke P, Souchère V, Alberola C, Ménassieu J (2009) Agronomy for sustainable agriculture: a review. Agron Sustain Dev 29(1):1–6
Lindow SE, Brandl MT (2003) Microbiology of the phyllosphere. Appl Environ Microbiol 69(4):1875–1883
Lucy M, Reed E, Glick BR (2004) Applications of free living plant growth-promoting rhizobacteria. Antonie van Leeuwenhoek 86(1):1–25
Lupwayi N, Olsen P, Sande E, Keyser H, Collins M, Singleton P, Rice W (2000) Inoculant quality and its evaluation. Field Crops Res 65(2–3):259–270
Ma W, Ma L, Li J, Wang F, Sisák I, Zhang F (2011) Phosphorus flows and use efficiencies in production and consumption of wheat, rice, and maize in China. Chemosphere 84(6):814–821
Mahdi SS, Hassan G, Samoon S, Rather H, Dar SA, Zehra B (2010) Bio-fertilizers in organic agriculture. J Phytol 2(10)
Malusá E, Sas-Paszt L, Ciesielska J (2012) Technologies for beneficial microorganisms inocula used as biofertilizers. Sci World J 2012:491206
Malusà E, Pinzari F, Canfora L (2016) Efficacy of biofertilizers: challenges to improve crop production. In: Microbial inoculants in sustainable agricultural productivity. Springer, pp 17–40
Mani D, Kumar C (2014) Biotechnological advances in bioremediation of heavy metals contaminated ecosystems: an overview with special reference to phytoremediation. Int J Environ Sci Technol 11(3):843–872
Martínez-Romero E (2009) Coevolution in Rhizobium-legume symbiosis? DNA Cell Biol 28(8):361–370
Mathew A, Eberl L, Carlier AL (2014) A novel siderophore-independent strategy of iron uptake in the genus Burkholderia. Mol Microbiol 91(4):805–820
Mayak S, Tirosh T, Glick BR (2004) Plant growth-promoting bacteria that confer resistance to water stress in tomatoes and peppers. Plant Sci 166(2):525–530
Meena VS, Maurya B, Verma JP (2014) Does a rhizospheric microorganism enhance K+ availability in agricultural soils? Microbiol Res 169(5–6):337–347
Megali L, Schlau B, Rasmann S (2015) Soil microbial inoculation increases corn yield and insect attack. Agron Sustainable Dev 35(4):1511–1519
Mirza BS, Rodrigues JL (2012) Development of a direct isolation procedure for free-living diazotrophs under controlled hypoxic conditions. Appl Environ Microbiol 78(16):5542–5549
Mohammadi K (2012) Phosphorus solubilizing bacteria: occurrence, mechanisms and their role in crop production. Resour Environ 2(1):80–85
Mohammadi K, Sohrabi Y (2012) Bacterial biofertilizers for sustainable crop production: a review. ARPN J Agric Biol Sci 7(5):307–316
Molina-Romero D, Baez A, Quintero-Hernández V, Castañeda-Lucio M, Fuentes-Ramírez L, Bustillos-Cristales M et al (2017) Compatible bacterial mixture, tolerant to desiccation, improves maize plant growth. PLoS One 12(11):e0187913
Mukhuba M, Roopnarain A, Adeleke R, Moeletsi M, Makofane R (2018) Comparative assessment of bio-fertiliser quality of cow dung and anaerobic digestion effluent. Cogent Food Agric 4(1):1435019
Mulongoy K, Gianinazzi S, Roger P-A, Dommergues Y (1992) Biofertilizers: agronomic and environmental impacts and economics. In: Da Silva EJ, Ratledge C, Sasson A (eds) Biotechnology: economic and social aspects. Issues for developing countries. Cambridge University Press, Cambridge, pp 55–69
N2Africa (2015) N2Africa revitalizes legume production in Nigeria. IITA Research to Nourish Africa (06/01/2016)
Naylor D, Coleman-Derr D (2018) Drought stress and root-associated bacterial communities. Front Plant Sci 8:2223
Ndakidemi PA, Bambara S, Makoi JH (2011) Micronutrient uptake in common bean (Phaseolus vulgaris L.) as affected by Rhizobium inoculation, and the Supply of Molybdenum and Lime. Plant Omics 4(1):40
Noinaj N, Guillier M, Barnard TJ, Buchanan SK (2010) TonB-dependent transporters: regulation, structure and function. Annu Rev Microbiol 64:43–60
O’hara G, Yates R, Howieson J (2002) Selection of strains of root nodule bacteria to improve inoculant performance and increase legume productivity in stressful environments. In: Herridge D (ed) Inoculants and nitrogen fixation of legumes in Vietnam. ACIAR Proceedings
Ohyama T, Momose A, Ohtake N, Sueyoshi K, Sato T, Nakanishi Y, Ando S (2014) Nitrogen fixation in sugarcane. Advances in biology and ecology of nitrogen fixation. pp 47–70
Oldroyd GE, Murray JD, Poole PS, Downie JA (2011) The rules of engagement in the legume-rhizobial symbiosis. Annu Rev Genet 45:119–144
Oliveira C, Alves V, Marriel I, Gomes E, Scotti M, Carneiro N, Guimaraes C, Schaffert R, Sa N (2009) Phosphate solubilizing microorganisms isolated from rhizosphere of maize cultivated in an oxisol of the Brazilian Cerrado Biome. Soil Biol Biochem 41(9):1782–1787
Olsen PE, Rice WA, Bordeleau LM, Demidoff A, Collins MM (1996) Levels and identities of nonrhizobial microorganisms found in commercial legume inoculant made with nonsterile peat carrier. Can J Microbiol 42(1):72–75
Onofre-Lemus J, Hernández-Lucas I, Girard L, Caballero-Mellado J (2009) ACC (1-aminocyclopropane-1-carboxylate) deaminase activity, a widespread trait in Burkholderia species, and its growth-promoting effect on tomato plants. Appl Environ Microbiol 75(20):6581–6590
Panda SP, Mishra CSK (2007) Bioremediation of environmental degradation a feasible option for ecorestoration. In: Environmental biotechnology. APH Publishing Corporation, New Delhi, pp 153–164
Parani K, Saha B (2012) Prospects of using phosphate solubilizing Pseudomonas as bio fertilizer. Eur J Biol Sci 4(2):40–44
Parmar P, Sindhu S (2013) Potassium solubilization by rhizosphere bacteria: influence of nutritional and environmental conditions. J Microbiol Res 3(1):25–31
Parnell JJ, Berka R, Young HA, Sturino JM, Kang Y, Barnhart DM, DiLeo MV (2016) From the lab to the farm: An industrial perspective of plant beneficial microorganisms. Front Plant Sci 7:1110
Patel N, Patel Y, Pandya H (2014) Bio fertilizer: a promising tool for sustainable farming. IJIRSET 3(9):15838, 15842
Pathak DV, Kumar M, Rani K (2017) Microorganisms for green revolution. In: Panpatte DG, Jhala YK, Vyas RV, Shelat HN (eds) Microbes for sustainable crop production, vol 1. Springer Nature, Singapore
Patten CL, Glick BR (1996) Bacterial biosynthesis of indole-3-acetic acid. Can J Microbiol 42(3):207–220
Patten CL, Glick BR (2002) Role of Pseudomonas putida indoleacetic acid in development of the host plant root system. Appl Environ Microbiol 68(8):3795–3801
Peoples M, Brockwell J, Herridge D, Rochester I, Alves B, Urquiaga S, Boddey R, Dakora F, Bhattarai S, Maskey S (2009) The contributions of nitrogen-fixing crop legumes to the productivity of agricultural systems. Symbiosis 48(1–3):1–17
Pérombelon M (2002) Potato diseases caused by soft rot erwinias: an overview of pathogenesis. Plant Pathol 51(1):1–12
Piechulla B, Lemfack MC, Kai M (2017) Effects of discrete bioactive microbial volatiles on plants and fungi. Plant Cell Environ 40(10):2042–2067
Pindi PK, Satyanarayana S (2012) Liquid microbial consortium-a potential tool for sustainable soil health. J Biofertil Biopestic 03(04)
Radzki W, Manero FG, Algar E, García JL, García-Villaraco A, Solano BR (2013) Bacterial siderophores efficiently provide iron to iron-starved tomato plants in hydroponics culture. Antonie van Leeuwenhoek 104(3):321–330
Raimi A, Adeleke R (2018) Quality assessment of commercial biofertilisers and the awareness of smallholder farmers in Gauteng province, South Africa. Masters Dissertation, University of South Africa, South Africa
Raimi A, Adeleke R, Roopnarain A (2017) Soil fertility challenges and biofertiliser as a viable alternative for increasing smallholder farmer crop productivity in sub-Saharan Africa. Cogent Food Agric 3:1–26
Rascio N, Rocca NL (2013) Biological nitrogen fixation. In: Reference module in earth systems and environmental sciences. Encyclopedia of ecology. https://doi.org/10.1016/b978-0-12-409548-9.00685-0
Raza W, Ling N, Liu D, Wei Z, Huang Q, Shen Q (2016) Volatile organic compounds produced by Pseudomonas fluorescens WR-1 restrict the growth and virulence traits of Ralstonia solanacearum. Microbiol Res 192:103–113
Reddy L, Giller K (2008) How effective are effective micro-organisms. LEISA Magazine 24:18–19
Reinhold-Hurek B, Hurek T, Gillis M, Hoste B, Vancanneyt M, Kersters K, De Ley J (1993) Azoarcus gen. nov., nitrogen-fixing proteobacteria associated with roots of kallar grass (Leptochloa fusca (L.) Kunth), and description of two species, Azoarcus indigens sp. nov. and Azoarcus communis sp. nov. Int J Syst Evol Microbiol 43(3):574–584
Reis VM, Teixeira KRDS (2015) Nitrogen fixing bacteria in the family Acetobacteraceae and their role in agriculture. J Basic Microbiol 55(8):931–949
Ribaudo CM, Krumpholz EM, Cassán FD, Bottini R, Cantore ML, Curá JA (2006) Azospirillum sp. promotes root hair development in tomato plants through a mechanism that involves ethylene. J Plant Growth Regul 25(2):175–185
Richardson AE, Simpson RJ (2011) Soil microorganisms mediating phosphorus availability update on microbial phosphorus. Plant Physiol 156(3):989–996
Richardson AE, Barea J-M, Mcneill AM, Prigent-Combaret C (2009) Acquisition of phosphorus and nitrogen in the rhizosphere and plant growth promotion by microorganisms. Plant Soil 321(1–2):305–339
Rodrigues EP, Rodrigues LS, de Oliveira ALM, Baldani VLD, dos Santos Teixeira KR, Urquiaga S, Reis VM (2008) Azospirillum amazonense inoculation: effects on growth, yield and N2 fixation of rice (Oryza sativa L.). Plant Soil 302(1–2):249–261
Rokhbakhsh-Zamin F, Sachdev D, Kazemi-Pour N, Engineer A, Pardesi KR, Zinjarde S, Chopade BA (2011) Characterization of plant-growth-promoting traits of Acinetobacter species isolated from rhizosphere of Pennisetum glaucum. J Microbiol Biotechnol 21(6):556–566
Roy R, Finck A, Blair G, Tandon H (2006) Plant nutrition for food security. A guide for integrated nutrient management. FAO Fertil Plant Nutr Bull 16:368
Rudrappa T, Splaine RE, Biedrzycki ML, Bais HP (2008) Cyanogenic Pseudomonads influence multitrophic interactions in the rhizosphere. PLoS One 3(4):e2073
Ryu CM, Farag MA, Hu CH, Reddy MS, Kloepper JW, Paré PW (2004) Bacterial volatiles induce systemic resistance in Arabidopsis. Plant Physiol 134(3):1017–1026
Saleem M, Arshad M, Hussain S, Bhatti AS (2007) Perspective of plant growth promoting rhizobacteria (PGPR) containing ACC deaminase in stress agriculture. J Ind Microbiol Biotechnol 34(10):635–648
Sangeeth K, Bhai RS, Srinivasan V (2012) Paenibacillus glucanolyticus, a promising potassium solubilizing bacterium isolated from black pepper (Piper nigrum L.) rhizosphere. JOSAC 21(2):118–124
Santi C, Bogusz D, Franche C (2013) Biological nitrogen fixation in non-legume plants. Ann Bot 111(5):743–767
Santoro MV, Zygadlo J, Giordano W, Banchio E (2011) Volatile organic compounds from rhizobacteria increase biosynthesis of essential oils and growth parameters in peppermint (Mentha piperita). Plant Physiol Biochem 49(10):1177–1182
Sarkar A, Saha M, Meena VS (2017) Plant Beneficial Rhizospheric Microbes (PBRMs): prospects for increasing productivity and sustaining the resilience of soil fertility. In: Meena V, Mishra P, Bisht J, Pattanayak A (eds) Agriculturally important microbes for sustainable agriculture. Springer, Singapore, pp 3–29
Sayyed R, Gangurde N, Patel P, Joshi S, Chincholkar S (2010) Siderophore production by Alcaligenes faecalis and its application for growth promotion in Arachis hypogaea. Indian J Biotechnol 9:302–307
Sayyed RZ, Reddy MS, Vijay Kumar K, Yellareddygari SKR, Deshmukh AM, Patel PR, Gangurde NS (2012) Potential of plant growth-promoting rhizobacteria for sustainable agriculture. In: Maheshwari DK (ed) Bacteria in agrobiology: plant probiotics. Springer, Berlin, pp 287–293
Schulz-Bohm K, Martín-Sánchez L, Garbeva P (2017) Microbial volatiles: small molecules with an important role in intra-and inter-kingdom interactions. Front Microbiol 8:2484
Sellstedt A, Richau KH (2013) Aspects of nitrogen-fixing Actinobacteria, in particular free-living and symbiotic Frankia. FEMS Microbiol Lett 342(2):179–186
Shaharoona B, Naveed M, Arshad M, Zahir ZA (2008) Fertilizer-dependent efficiency of Pseudomonads for improving growth, yield, and nutrient use efficiency of wheat (Triticum aestivum L.). Appl Microbiol Biotechnol 79(1):147–155
Shanmugaiah V, Nithya K, Harikrishnan H, Jayaprakashvel M, Balasubramanian N (2015) Biocontrol mechanisms of siderophores against bacterial plant pathogens. In: Sustainable approaches to controlling plant pathogenic bacteria. CRC Press, pp 182–205
Shanware AS, Kalkar SA, Trivedi MM (2014) Potassium solublisers: occurrence, mechanism and their ole as competent biofertilizers. IJCMAS 3:622–629
Sharma A, Johri B, Sharma A, Glick B (2003) Plant growth-promoting bacterium Pseudomonas sp. strain GRP3 influences iron acquisition in mung bean (Vigna radiata L. Wilzeck). Soil Biol Biochem 35(7):887–894
Sharma M, Ghosh R, Telangre R, Rathore A, Saifulla M, Mahalinga DM, Saxena DR, Jain YK (2016) Environmental influences on pigeonpea-Fusarium udum interactions and stability of genotypes to Fusarium wilt. Front Plant Sci 7:253
Sheng X (2005) Growth promotion and increased potassium uptake of cotton and rape by a potassium releasing strain of Bacillus edaphicus. Soil Biol Biochem 37(10):1918–1922
Shridhar BS (2012) Review: Nitrogen fixing microorganisms. Microbiol Res J Int 3(1):46–52
Sickerman NS, Hu Y, Ribbe MW (2017) Nitrogenase assembly: strategies and procedures. Methods Enzymol 595:261–302
Singh DP, Singh HB, Prabha R (2016) Book review: Microbial inoculants in sustainable agricultural productivity (vol 2). Functional application. Front Microbiol 7:2105
Singh M, Kumar A, Singh R, Pandey KD (2017) Endophytic bacteria: a new source of bioactive compounds. 3 Biotech 7(5):315
Smaling E, Roscoe R, Lesschen J, Bouwman A, Comunello E (2008) From forest to waste: assessment of the Brazilian soybean chain, using nitrogen as a marker. Agric Ecosyst Environ 128(3):185–197
Solaiman ZM, Anawar HM (2015) Rhizosphere microbes interactions in medicinal plants. In: Egamberdieva D, Shrivastava S, Varma A (eds) Plant-Growth-Promoting Rhizobacteria (PGPR) and medicinal plants. Soil biology, vol 42. Springer, Cham, pp 19–41
Solanki MK, Kumar S, Pandey AK, Srivastava S, Singh RK, Kashyap PL, Srivastava AK, Arora DK (2012) Diversity and antagonistic potential of Bacillus spp. associated to the rhizosphere of tomato for the management of Rhizoctonia solani. Biocontrol Sci Technol 22(2):203–217
Soltani AA, Khavazi K, Asadi-Rahmani H, Omidvari M, Dahaji PA, Mirhoseyni H (2010) Plant growth promoting characteristics in some Flavobacterium spp. isolated from soils of Iran. J Agric Sci 2(4):106
Somasegaran P, Hoben HJ (2012) Handbook for rhizobia: methods in legume-Rhizobium technology. Springer Science & Business Media, New York
Srinivasan R, Yandigeri MS, Kashyap S, Alagawadi AR (2012) Effect of salt on survival and P-solubilization potential of phosphate solubilizing microorganisms from salt affected soils. Saudi J Biol Sci 19(4):427–434
Stephens J, Rask H (2000) Inoculant production and formulation. Field Crops Res 65(2–3):249–258
Sundara B, Natarajan V, Hari K (2002) Influence of phosphorus solubilizing bacteria on the changes in soil available phosphorus and sugarcane and sugar yields. Field Crops Res 77(1):43–49
Suyal DC, Soni R, Sai S, Goel R (2016) Microbial inoculants as biofertilizer. In: Microbial inoculants in sustainable agricultural productivity, vol 1. Springer, pp 311–318
Swain H, Abhijita S (2013) Nitrogen fixation and its improvement through genetic engineering. J Global Biosci 2:98–112
Swain MR, Naskar SK, Ray RC (2007) Indole-3-acetic acid production and effect on sprouting of yam (Dioscorea rotundata L.) minisetts by Bacillus subtilis isolated from culturable cowdung microflora. Pol J Microbiol 56(2):103–110
Szilagyi-Zecchin VJ, Mógor ÁF, Figueiredo GGO (2016) Strategies for characterization of agriculturally important bacteria. In: Singh D, Singh H, Prabha R (eds) Microbial inoculants in sustainable agricultural productivity. Springer, India, pp 1–3
Tahir HAS, Gu Q, Wu H, Niu Y, Huo R, Gao X (2017) Bacillus volatiles adversely affect the physiology and ultra-structure of Ralstonia solanacearum and induce systemic resistance in tobacco against bacterial wilt. Sci Rep 7:40481
Thakuria D, Talukdar N, Goswami C, Hazarika S, Boro R, Khan M (2004) Characterization and screening of bacteria from rhizosphere of rice grown in acidic soils of Assam. Curr Sci 86(7):978–985
Thamer S, Schädler M, Bonte D, Ballhorn DJ (2011) Dual benefit from a belowground symbiosis: nitrogen fixing rhizobia promote growth and defense against a specialist herbivore in a cyanogenic plant. Plant Soil 341(1–2):209–219
Trabelsi D, Mhamdi R (2013) Microbial inoculants and their impact on soil microbial communities: a review. Biomed Res Int 2013:1–11
Transparency Market Research (2014) Biofertilizers (Nitrogen fixing, phosphate solubilizing and others) Market for seed treatment and soil treatment applications – Global industry analysis, size, share, growth, trends and forecast, 2013–2019. Transpareny Market Research, Albany, NY
Vacheron J, Desbrosses G, Bouffaud M-L, Touraine B, Moënne-Loccoz Y, Muller D, Legendre L, Wisniewski-Dyé F, Prigent-Combaret C (2013) Plant growth-promoting rhizobacteria and root system functioning. Front Plant Sci 4:356
Vejan P, Abdullah R, Khadiran T, Ismail S, Nasrulhaq Boyce A (2016) Role of plant growth promoting rhizobacteria in agricultural sustainability–a review. Molecules 21(5):573
Verma A, Kukreja K, Pathak D, Suneja S, Narula N (2001) In vitro production of plant growth regulators (PGRs) by Azotobacter chroococcum. Indian J Microbiol 41(4):305–307
Vessey JK (2003) Plant growth promoting rhizobacteria as biofertilizers. Plant Soil 255(2):571–586
Villegas MDC, Rome S, Mauré L, Domergue O, Gardan L, Bailly X, Brunel B (2006) Nitrogen-fixing Sinorhizobia with Medicago laciniata constitute a novel biovar (bv. medicaginis) of S. meliloti. Syst Appl Microbiol 29(7):526–538
Wagner SC (2012) Biological nitrogen fixation. Nat Educ Knowl 3(10):15
Wallace MB, Knausenberger WI (1997) Inorganic fertilizer use in Africa: environmental and economic dimensions. Environmental and Natural Resources Policy and Training (EPAT) Project Applied Research, Technical Assistance and Training Winrock International Environmental Alliance Arlington. Virginia, USA. http://hdl.handle.net/10919/68427
Wang C-J, Yang W, Wang C, Gu C, Niu D-D et al (2012) Induction of drought tolerance in cucumber plants by a consortium of three plant growth-promoting rhizobacterium strains. PLoS One 7(12):e52565
Wang T, Liu M-Q, Li H-X (2014) Inoculation of phosphate-solubilizing bacteria Bacillus thuringiensis B1 increases available phosphorus and growth of peanut in acidic soil. Acta Agric Scand B 64(3):252–259
Whipps JM (2001) Microbial interactions and biocontrol in the rhizosphere. J Exp Bot 52(1):487–511
Wu LJ, Wang HQ, Wang ET, Chen WX, Tian CF (2011) Genetic diversity of nodulating and non-nodulating rhizobia associated with wild soybean (Glycine soja Sieb. and Zucc.) in different ecoregions of China. FEMS Microbiol Ecol 76(3):439–450
Yanni YG, Rizk RY, El-Fattah FKA, Squartini A, Corich V, Giacomini A, De Bruijn F, Rademaker J, Maya-Flores J, Ostrom P (2001) The beneficial plant growth-promoting association of Rhizobium leguminosarum bv. trifolii with rice roots. Funct Plant Biol 28(9):845–870
Yasmin S, Hafeez FY, Mirza MS, Rasul M, Arshad HM, Zubair M, Iqbal M (2017) Biocontrol of bacterial leaf blight of rice and profiling of secondary metabolites produced by rhizospheric Pseudomonas aeruginosa BRp3. Front Microbiol 8:1895
Zahran HH (1999) Rhizobium-legume symbiosis and nitrogen fixation under severe conditions and in an arid climate. Microbiol Mol Biol Rev 63(4):968–989
Zalewska M, Antkowiak M (2013) Gibberellic acid effect on growth and flowering of Ajania Pacifica/Nakai/Bremer et Humphries. J Hort Res 21(1):21–27
Zehr JP, Kudela RM (2011) Nitrogen cycle of the open ocean: from genes to ecosystems. Ann Rev Mar Sci 3:197–225
Zhang F, Shen J, Zhang J, Zuo Y, Li L, Chen X (2010) Rhizosphere processes and management for improving nutrient use efficiency and crop productivity: implications for China. Adv Agron 107:1–32
Zhang Y, Yang Q, Ling J, Van Nostrand JD, Shi Z, Zhou J, Dong J (2017) Diversity and structure of diazotrophic communities in mangrove rhizosphere, revealed by high-throughput sequencing. Front Microbiol 8:2032
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The authors are grateful to the National Research Foundation (NRF) and the Department of Agriculture, Forestry and Fisheries (DAFF) for funding our inoculant research work.
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Adeleke, R.A., Raimi, A.R., Roopnarain, A., Mokubedi, S.M. (2019). Status and Prospects of Bacterial Inoculants for Sustainable Management of Agroecosystems. In: Giri, B., Prasad, R., Wu, QS., Varma, A. (eds) Biofertilizers for Sustainable Agriculture and Environment . Soil Biology, vol 55. Springer, Cham. https://doi.org/10.1007/978-3-030-18933-4_7
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