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Membrane-Containing Icosahedral Bacteriophage PRD1: The Dawn of Viral Lineages

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Physical Virology

Part of the book series: Advances in Experimental Medicine and Biology ((AEMB,volume 1215))

Abstract

Membrane-containing enterobacterial phage PRD1 was isolated from sewage more than 40 years ago. At that time none would have expected the impact that unravelling its biology would have on modern virology and on the way we understand virus assembly, evolution and classification today. PRD1 structural analyses have provided a framework for understanding some aspects of virus evolution—introducing the concept of “viral lineages”—where the three-dimensional structures of virus capsids represent the fingerprint for evolutionary relationship which cannot be traced from the sequence data. In this review we summarise those findings that have led to the notion of viral lineages and the multidisciplinary efforts made in elucidating PRD1 life cycle. These studies have rendered PRD1 a model system not only for the family Tectiviridae to which it belongs, but more generally to complex DNA viruses enclosing a membrane vesicle beneath the capsid shell.

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Acknowledgments

We are grateful to Stavros Azinas and Ralf Richter for the collaborative work on virus mechanics and Dennis Bamford for insightful comments on the review. We also thank Juliet Cowper for language editing. This study was supported by the Spanish Ministerio de Economía y Competitividad (MINECO/FEDER BFU2015-64541-R), by the Basque Departamento de Desarrollo Económico e Infraestructuras (Ref: 37-2017-00036) and Departamento de Educación, Política Lingüística y Cultura (Ref: PRE_2016_2_0151) to N.G.A.A. H.M.O was supported by the University of Helsinki and Academy of Finland funding for Instruct-FI research infrastructure and Biomolecular Complex Purification (BioComplex) core facility. We thank MINECO for the Severo Ochoa Excellence Accreditation to the CIC bioGUNE (SEV-2016-0644).

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Authors and Affiliations

  1. Faculty of Biological and Environmental Sciences, Molecular and Integrative Biosciences Research Programme, University of Helsinki, Helsinki, Finland

    Hanna M. Oksanen

  2. Molecular Recognition and Host-Pathogen Interactions Programme, CIC bioGUNE, CIBERehd, Derio, Spain

    Nicola G. A. Abrescia

  3. IKERBASQUE, Basque Foundation for Science, Bilbao, Spain

    Nicola G. A. Abrescia

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  1. Hanna M. Oksanen
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Correspondence to Hanna M. Oksanen or Nicola G. A. Abrescia .

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  1. Department of Molecular Life Sciences, University of Zurich, Zurich, Switzerland

    Urs F. Greber

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Oksanen, H.M., Abrescia, N.G.A. (2019). Membrane-Containing Icosahedral Bacteriophage PRD1: The Dawn of Viral Lineages. In: Greber, U. (eds) Physical Virology. Advances in Experimental Medicine and Biology, vol 1215. Springer, Cham. https://doi.org/10.1007/978-3-030-14741-9_5

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