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  • Conference proceedings
  • © 2013

Research in Computational Molecular Biology

17th Annual International Conference, RECOMB 2013, Beijing, China, April 7-10, 2013. Proceedings

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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 7821)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Conference series link(s): RECOMB: International Conference on Research in Computational Molecular Biology

Conference proceedings info: RECOMB 2013.

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  • ISBN: 978-3-642-37195-0
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Table of contents (32 papers)

  1. Front Matter

  2. eALPS: Estimating Abundance Levels in Pooled Sequencing Using Available Genotyping Data

    • Itamar Eskin, Farhad Hormozdiari, Lucia Conde, Jacques Riby, Chris Skibola, Eleazar Eskin et al.
    Pages 32-44
  3. Analysis of Metabolic Evolution in Bacteria Using Whole-Genome Metabolic Models

    • Ali A. Faruqi, William A. Bryant, John W. Pinney
    Pages 45-57
  4. Detecting Protein Conformational Changes in Interactions via Scaling Known Structures

    • Fei Guo, Shuai Cheng Li, Wenji Ma, Lusheng Wang
    Pages 58-74
  5. IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype Data

    • Dan He, Zhanyong Wang, Buhm Han, Laxmi Parida, Eleazar Eskin
    Pages 75-87
  6. An Optimal Algorithm for Building the Majority Rule Consensus Tree

    • Jesper Jansson, Chuanqi Shen, Wing-Kin Sung
    Pages 88-99
  7. UniNovo : A Universal Tool for de Novo Peptide Sequencing

    • Kyowon Jeong, Sangtae Kim, Pavel A. Pevzner
    Pages 100-117
  8. Identification of Ultramodified Proteins Using Top-Down Spectra

    • Xiaowen Liu, Shawna Hengel, Si Wu, Nikola Tolić, Ljiljana Pasa-Tolić, Pavel A. Pevzner
    Pages 132-144
  9. Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads

    • Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey Gurevich, Anton Korobeynikov, Alla Lapidus et al.
    Pages 158-170
  10. Inferring Intra-tumor Heterogeneity from High-Throughput DNA Sequencing Data

    • Layla Oesper, Ahmad Mahmoody, Benjamin J. Raphael
    Pages 171-172
  11. High Resolution Modeling of Chromatin Interactions

    • Christopher Reeder, David Gifford
    Pages 186-198
  12. A Linear Inside-Outside Algorithm for Correcting Sequencing Errors in Structured RNAs

    • Vladimir Reinharz, Yann Ponty, Jérôme Waldispühl
    Pages 199-211
  13. Learning Natural Selection from the Site Frequency Spectrum

    • Roy Ronen, Nitin Udpa, Eran Halperin, Vineet Bafna
    Pages 230-233

Other Volumes

  1. Research in Computational Molecular Biology

    17th Annual International Conference, RECOMB 2013, Beijing, China, April 7-10, 2013. Proceedings

About this book

This book constitutes the refereed proceedings of the 17th Annual International Conference on Research in Computational Molecular Biology, RECOMB 2013, held in Beijing, China, in April 2013. The 32 revised full papers were carefully reviewed and selected from 167 submissions. The papers cover a wide range of topics including molecular sequence analysis; genes and regulatory elements; molecular evolution; gene expression; biological networks; sequencing and genotyping technologies; genomics; epigenomics; metagenomics; population, statistical genetics; systems biology; computational proteomics; computational structural biology; imaging; large-scale data management.

Keywords

  • DNA sequencing
  • RNA
  • machine learning
  • pattern matching
  • unphased genotypes
  • algorithm analysis and problem complexity

Editors and Affiliations

  • School of Mathematics, Peking University, Beijing, P.R. China

    Minghua Deng

  • Bioinformatics Division, TNLIST/Department of Automation, Tsinghua University, Beijing, P.R. China

    Rui Jiang

  • Molecular and Computational Biology Program, University of Southern California, Los Angeles, USA

    Fengzhu Sun

  • Department of Automation, Tsinghua University, Beijing, China

    Xuegong Zhang

Bibliographic Information

Buying options

eBook USD 49.99
Price excludes VAT (USA)
  • ISBN: 978-3-642-37195-0
  • Instant PDF download
  • Readable on all devices
  • Own it forever
  • Exclusive offer for individuals only
  • Tax calculation will be finalised during checkout
Softcover Book USD 64.99
Price excludes VAT (USA)