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  • Conference proceedings
  • © 2012

Bioinformatics Research and Applications

8th International Symposium, ISBRA 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings

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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 7292)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Conference series link(s): ISBRA: International Symposium on Bioinformatics Research and Applications

Conference proceedings info: ISBRA 2012.

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Table of contents (31 papers)

  1. Front Matter

  2. Trie-based Apriori Motif Discovery Approach

    • Isra Al-Turaiki, Ghada Badr, Hassan Mathkour
    Pages 1-12
  3. Inapproximability of (1,2)-Exemplar Distance

    • Laurent Bulteau, Minghui Jiang
    Pages 13-23
  4. A Mixed Integer Programming Model for the Parsimonious Loss of Heterozygosity Problem

    • Daniele Catanzaro, Martine Labbé, Bjarni V. Halldórsson
    Pages 24-35
  5. Reconstruction of Transcription Regulatory Networks by Stability-Based Network Component Analysis

    • Xi Chen, Chen Wang, Ayesha N. Shajahan, Rebecca B. Riggins, Robert Clarke, Jianhua Xuan
    Pages 36-47
  6. A Transcript Perspective on Evolution

    • Yann Christinat, Bernard M. E. Moret
    Pages 48-59
  7. Identifying Rogue Taxa through Reduced Consensus: NP-Hardness and Exact Algorithms

    • Akshay Deepak, Jianrong Dong, David Fernández-Baca
    Pages 87-98
  8. GTP Supertrees from Unrooted Gene Trees: Linear Time Algorithms for NNI Based Local Searches

    • Paweł Górecki, J. Gordon Burleigh, Oliver Eulenstein
    Pages 102-114
  9. A Robinson-Foulds Measure to Compare Unrooted Trees with Rooted Trees

    • Paweł Górecki, Oliver Eulenstein
    Pages 115-126
  10. P-Binder: A System for the Protein-Protein Binding Sites Identification

    • Fei Guo, Shuai Cheng Li, Lusheng Wang
    Pages 127-138
  11. Non-identifiable Pedigrees and a Bayesian Solution

    • Bonnie Kirkpatrick
    Pages 139-152
  12. POPE: Pipeline of Parentally-Biased Expression

    • Victor Missirian, Isabelle Henry, Luca Comai, Vladimir Filkov
    Pages 177-188
  13. On Optimizing the Non-metric Similarity Search in Tandem Mass Spectra by Clustering

    • Jiří Novák, David Hoksza, Jakub Lokoč, Tomáš Skopal
    Pages 189-200
  14. On the Comparison of Sets of Alternative Transcripts

    • Aïda Ouangraoua, Krister M. Swenson, Anne Bergeron
    Pages 201-212

Other Volumes

  1. Bioinformatics Research and Applications

    8th International Symposium, ISBRA 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings

About this book

This book constitutes the refereed proceedings of the International Symposium on Bioinformatics Research and Applications, ISBRA 2012, held in Dallas, Texas, USA, in May 2012. The 26 revised full papers presented together with five invited talks were carefully reviewed and selected from 66 submissions. The papers address issues on various aspects of bioinformatics and computational biology and their applications.

Keywords

  • comparative genomics
  • evolutionary biology
  • protein sequences identification
  • systems biology
  • visualization
  • algorithm analysis and problem complexity

Editors and Affiliations

  • Departments of Bioengineering and Electrical Engineering, University of Texas at Dallas, Richardson, USA

    Leonidas Bleris

  • Department of Computer Science and Engineering, University of Connecticut, Storrs, USA

    Ion Măndoiu

  • Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, USA

    Russell Schwartz

  • School of Information Science and Engineering, Central South University, Changsha, China

    Jianxin Wang

Bibliographic Information

Buying options

eBook
USD 69.99
Price excludes VAT (USA)
  • ISBN: 978-3-642-30191-9
  • Instant PDF download
  • Readable on all devices
  • Own it forever
  • Exclusive offer for individuals only
  • Tax calculation will be finalised during checkout
Softcover Book
USD 89.99
Price excludes VAT (USA)