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Research in Computational Molecular Biology

15th Annual International Conference, RECOMB 2011, Vancouver, BC, Canada, March 28-31, 2011. Proceedings

  • Vineet Bafna
  • S. Cenk Sahinalp
Conference proceedings RECOMB 2011

Part of the Lecture Notes in Computer Science book series (LNCS, volume 6577)

Also part of the Lecture Notes in Bioinformatics book sub series (LNBI, volume 6577)

Table of contents

  1. Front Matter
  2. Swapnil Bhatia, Yong J. Kil, Beatrix Ueberheide, Brian Chait, Lemmuel L. Tayo, Lourdes J. Cruz et al.
    Pages 16-30
  3. Leonid Chindelevitch, Aviv Regev, Bonnie Berger
    Pages 31-33
  4. Leonid Chindelevitch, Daniel Ziemek, Ahmed Enayetallah, Ranjit Randhawa, Ben Sidders, Christoph Brockel et al.
    Pages 34-37
  5. Nilgun Donmez, Michael Brudno
    Pages 38-52
  6. Irit Gat-Viks, Renana Meller, Martin Kupiec, Ron Shamir
    Pages 69-69
  7. Allison P. Heath, George N. Bennett, Lydia E. Kavraki
    Pages 70-84
  8. Fereydoun Hormozdiari, Iman Hajirasouliha, Andrew McPherson, Evan E. Eichler, S. Cenk Sahinalp
    Pages 104-105
  9. Jim C. Huang, Nebojsa Jojic
    Pages 106-123
  10. Bonnie Kirkpatrick, Shuai Cheng Li, Richard M. Karp, Eran Halperin
    Pages 136-152
  11. Sooraj KuttyKrishnan, Jeffrey Sabina, Laura Langton, Mark Johnston, Michael R. Brent
    Pages 153-153
  12. Mark D. M. Leiserson, Diana Tatar, Lenore J. Cowen, Benjamin J. Hescott
    Pages 154-167
  13. Tien-ho Lin, Ziv Bar-Joseph, Robert F. Murphy
    Pages 204-221
  14. Jeffrey W. Martin, Anthony K. Yan, Chris Bailey-Kellogg, Pei Zhou, Bruce R. Donald
    Pages 222-237
  15. Paul Medvedev, Son Pham, Mark Chaisson, Glenn Tesler, Pavel Pevzner
    Pages 238-251
  16. Navodit Misra, Guy Blelloch, R. Ravi, Russell Schwartz
    Pages 252-266
  17. Hosein Mohimani, Wei-Ting Liu, Yu-Liang Yang, Susana P. Gaudêncio, William Fenical, Pieter C. Dorrestein et al.
    Pages 267-281
  18. Daniel Newkirk, Jacob Biesinger, Alvin Chon, Kyoko Yokomori, Xiaohui Xie
    Pages 283-297
  19. Julio Ng, Amihood Amir, Pavel A. Pevzner
    Pages 298-319
  20. William Noble, Zhi-jun Duan, Mirela Andronescu, Kevin Schutz, Sean McIlwain, Yoo Jung Kim et al.
    Pages 320-320
  21. Andrew S. Parker, Karl E. Griswold, Chris Bailey-Kellogg
    Pages 321-335
  22. Yu Peng, Henry C. M. Leung, S. M. Yiu, Francis Y. L. Chin
    Pages 337-338
  23. Tobias Petri, Robert Küffner, Ralf Zimmer
    Pages 339-354
  24. Yosef Prat, Menachem Fromer, Michal Linial, Nathan Linial
    Pages 355-357
  25. Shlomi Reuveni, Isaac Meilijson, Martin Kupiec, Eytan Ruppin, Tamir Tuller
    Pages 358-360
  26. Kyle E. Roberts, Patrick R. Cushing, Prisca Boisguerin, Dean R. Madden, Bruce R. Donald
    Pages 361-376
  27. Kerstin Scheubert, Franziska Hufsky, Florian Rasche, Sebastian Böcker
    Pages 377-391
  28. Solomon Shenker, Charles W. O’Donnell, Srinivas Devadas, Bonnie Berger, Jérôme Waldispühl
    Pages 408-423
  29. Dana Silverbush, Michael Elberfeld, Roded Sharan
    Pages 424-436
  30. Song Gao, Niranjan Nagarajan, Wing-Kin Sung
    Pages 437-451
  31. Jae Hoon Sul, Buhm Han, Eleazar Eskin
    Pages 452-467
  32. Chittaranjan Tripathy, Jianyang Zeng, Pei Zhou, Bruce Randall Donald
    Pages 483-498
  33. Fabio Vandin, Eli Upfal, Benjamin J. Raphael
    Pages 499-500
  34. Fabian L. Wauthier, Michael I. Jordan, Nebojsa Jojic
    Pages 516-530
  35. Yun Yu, Tandy Warnow, Luay Nakhleh
    Pages 531-545
  36. Shay Zakov, Yoav Goldberg, Michael Elhadad, Michal Ziv-Ukelson
    Pages 546-562
  37. Jianyang Zeng, Kyle E. Roberts, Pei Zhou, Bruce R. Donald
    Pages 563-578

About these proceedings

Introduction

This book constitutes the refereed proceedings of the 15th Annual International Conference on Research in Computational Molecular Biology, RECOMB 2011, held in Vancouver, Canada, in March 2011. The 43 revised full papers were carefully reviewed and selected from 153 submissions. The papers cover a wide range of topics including molecular sequence analysis; recognition of genes and regulatory elements; molecular evolution; gene expression; biological networks; sequencing and genotyping technologies; genomics; population, statistical genetics; systems biology; imaging; computational proteomics; molecular structural biology.

Keywords

bioinformatics computational biology computational life science human genome project and systems modeling mathematical biology pattern matching proteonomics synthetic biology

Editors and affiliations

  • Vineet Bafna
    • 1
  • S. Cenk Sahinalp
    • 2
  1. 1.EBU3bUniversity of California San DiegoLa JollaUSA
  2. 2.School of Computing ScienceSimon Fraser UniversityBurnabyCanada

Bibliographic information

  • DOI https://doi.org/10.1007/978-3-642-20036-6
  • Copyright Information Springer Berlin Heidelberg 2011
  • Publisher Name Springer, Berlin, Heidelberg
  • eBook Packages Computer Science
  • Print ISBN 978-3-642-20035-9
  • Online ISBN 978-3-642-20036-6
  • Series Print ISSN 0302-9743
  • Series Online ISSN 1611-3349
  • Buy this book on publisher's site