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  • Conference proceedings
  • © 2007

Distributed, High-Performance and Grid Computing in Computational Biology

International Workshop, GCCB 2006, International Workshop, GCCB 2006, Eilat, Israel, January 21, 2007, Proceedings

Part of the book series: Lecture Notes in Computer Science (LNCS, volume 4360)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Conference series link(s): GCCB: International Workshop on Grid Computing in Computational Biology

Conference proceedings info: GCCB 2007.

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Table of contents (13 papers)

  1. Front Matter

  2. Session 1a. “Sequence Analysis”

    1. Combining a High-Throughput Bioinformatics Grid and Bioinformatics Web Services

      • Chunyan Wang, Paul M. K. Gordon, Andrei L. Turinsky, Jason Burgess, Terry Dalton, Christoph W. Sensen
      Pages 1-10
    2. Using Public Resource Computing and Systematic Pre-calculation for Large Scale Sequence Analysis

      • Thomas Rattei, Mathias Walter, Roland Arnold, David P. Anderson, Werner Mewes
      Pages 11-18
    3. Accelerated microRNA-Precursor Detection Using the Smith-Waterman Algorithm on FPGAs

      • Patrick May, Gunnar W. Klau, Markus Bauer, Thomas Steinke
      Pages 19-32
  3. Session 1b. “Grids for Screening and Property Prediction”

    1. Implementation of a Distributed Architecture for Managing Collection and Dissemination of Data for Fetal Alcohol Spectrum Disorders Research

      • Andrew Arenson, Ludmila Bakhireva, Tina Chambers, Christina Deximo, Tatiana Foroud, Joseph Jacobson et al.
      Pages 33-44
    2. Grid-Enabled High Throughput Virtual Screening

      • Nicolas Jacq, Vincent Breton, Hsin-Yen Chen, Li-Yung Ho, Martin Hofmann, Hurng-Chun Lee et al.
      Pages 45-59
    3. Grid Computing for the Estimation of Toxicity: Acute Toxicity on Fathead Minnow (Pimephales promelas)

      • Uko Maran, Sulev Sild, Paolo Mazzatorta, Mos Casalegno, Emilio Benfenati, Mathilde Romberg
      Pages 60-74
    4. Peer-to-Peer Experimentation in Protein Structure Prediction: An Architecture, Experiment and Initial Results

      • Xueping Quan, Chris Walton, Dietlind L. Gerloff, Joanna L. Sharman, Dave Robertson
      Pages 75-98
  4. Session 2a. “Data Management”

    1. A Distributed System for Genetic Linkage Analysis

      • Mark Silberstein, Dan Geiger, Assaf Schuster
      Pages 110-123
    2. Enabling Data Sharing and Collaboration in Complex Systems Applications

      • Michael A. Johnston, Jordi Villà-Freixa
      Pages 124-140
    3. Accessing Bio-databases with OGSA-DAI - A Performance Analysis

      • Samatha Kottha, Kumar Abhinav, Ralph Müller-Pfefferkorn, Hartmut Mix
      Pages 141-156
  5. Session 2b. “Collaborative Environments”

    1. Systems Support for Remote Visualization of Genomics Applications over Wide Area Networks

      • Lars Ailo Bongo, Grant Wallace, Tore Larsen, Kai Li, Olga Troyanskaya
      Pages 157-174
    2. HVEM DataGrid: Implementation of a Biologic Data Management System for Experiments with High Voltage Electron Microscope

      • Im Young Jung, In Soon Cho, Heon Y. Yeom, Hee S. Kweon, Jysoo Lee
      Pages 175-190
  6. Back Matter

Other Volumes

  1. Distributed, High-Performance and Grid Computing in Computational Biology

Keywords

  • Session
  • algorithms
  • architecture
  • bioinformatics
  • biology
  • collaborative environments
  • computational biology
  • databases
  • distributed algorithms
  • distributed computing
  • distributed databases
  • distributed processing
  • genome
  • grid computing
  • sequence analysis
  • algorithm analysis and problem complexity

Bibliographic Information

Buying options

eBook USD 39.99
Price excludes VAT (Canada)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 54.99
Price excludes VAT (Canada)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions