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Advances in Plant Omics and Systems Biology Approaches

  • Book
  • © 2021

Overview

Editors:
  1. Flavia Vischi Winck

    1. Center for Nuclear Energy in Agriculture (CENA), University of São Paulo, Piracicaba, Brazil

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  • Specific information on land plants and microalgae will be included
  • Cutting edge technologies will be introduced and examined
  • Examines the future of plant "omics"

Part of the book series: Advances in Experimental Medicine and Biology (AEMB, volume 1346)

Part of the book sub series: Proteomics, Metabolomics, Interactomics and Systems Biology (PMISB)

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Table of contents (10 chapters)

  1. Front Matter

    Pages i-xxiv
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  2. Introduction: Advances in Plant Omics and Systems Biology

    • Flavia Vischi Winck, Lucca de F. R. Monteiro, Glaucia M. Souza
    Pages 1-9

  3. Modern Approaches for Transcriptome Analyses in Plants

    • Diego Mauricio Riaño-Pachón, Hector Fabio Espitia-Navarro, John Jaime Riascos, Gabriel Rodrigues Alves Margarido
    Pages 11-50

  4. Plant Proteomics and Systems Biology

    • Flavia Vischi Winck, André Luis Wendt dos Santos, Maria Juliana Calderan-Rodrigues
    Pages 51-66

  5. Subcellular Proteomics as a Unified Approach of Experimental Localizations and Computed Prediction Data for Arabidopsis and Crop Plants

    • Cornelia M. Hooper, Ian R. Castleden, Sandra K. Tanz, Sally V. Grasso, A. Harvey Millar
    Pages 67-89

  6. The Contribution of Metabolomics to Systems Biology: Current Applications Bridging Genotype and Phenotype in Plant Science

    • Marina C. M. Martins, Valeria Mafra, Carolina C. Monte-Bello, Camila Caldana
    Pages 91-105

  7. Interactomes: Experimental and In Silico Approaches

    • Luíza Lane de Barros Dantas, Marcelo Mendes Brandão
    Pages 107-117

  8. Probabilistic Graphical Models Applied to Biological Networks

    • Natalia Faraj Murad, Marcelo Mendes Brandão
    Pages 119-130

  9. Cataloging Posttranslational Modifications in Plant Histones

    • Ericka Zacarias, J. Armando Casas-Mollano
    Pages 131-154

  10. Current Challenges in Plant Systems Biology

    • Danilo de Menezes Daloso, Thomas C. R. Williams
    Pages 155-170

  11. Contribution of Omics and Systems Biology to Plant Biotechnology

    • Ronaldo J. D. Dalio, Celso Gaspar Litholdo Jr, Gabriela Arena, Diogo Magalhães, Marcos A. Machado
    Pages 171-188

  12. Back Matter

    Pages 189-201
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Keywords

About this book

In the post-genomic era, several plant species have been sequenced and massive genomic information is now available which contributed to expand the development of novel technical strategies for the study of additional levels of biological information of plant species. This book focuses on the “omics” approaches together with systems analysis of several different plant species, which have revealed very interesting variations on the cellular responses at the protein, transcript and metabolite levels in response to changes environmental conditions. The volume covers recent technological advances in the area of “omics” and synthesizes recent findings of the field of plant “omics” and systems biology together along with techniques that can be applied for such studies.

Editors and Affiliations

  • Center for Nuclear Energy in Agriculture (CENA), University of São Paulo, Piracicaba, Brazil

    Flavia Vischi Winck

About the editor

Flavia Vischi Winck is a biologist, with a PhD in molecular biology. She has worked on protein chemistry, plant systems biology, functional genomics, molecular biology and biochemistry with focus in understanding signaling mechanisms and complex gene regulatory networks using proteomics, transcriptomics and bioinformatics approaches in a systems biology framework.

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