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  • © 2013

Microsatellites

Methods and Protocols

  • Includes cutting-edge methods and protocols for microsatellite markers in the MiMB standard format
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts
  • Includes supplementary material: sn.pub/extras

Part of the book series: Methods in Molecular Biology (MIMB, volume 1006)

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Table of contents (21 protocols)

  1. Front Matter

    Pages i-xi
  2. Microsatellites: Evolution and Contribution

    • Panagiotis Madesis, Ioannis Ganopoulos, Athanasios Tsaftaris
    Pages 1-13
  3. Discovery and Development of Microsatellites

    1. Front Matter

      Pages 15-15
    2. Screening of Genomic Libraries

      • Valdenice M. Novelli, Mariângela Cristofani-Yaly, Marinês Bastianel, Dario A. Palmieri, Marcos A. Machado
      Pages 17-24
    3. PCR-Based Isolation of Microsatellite Arrays (PIMA)

      • Heng-Sheng Lin, Song-Bin Chang
      Pages 25-55
    4. Microsatellite DNA Capture from Enriched Libraries

      • Elena G. Gonzalez, Rafael Zardoya
      Pages 67-87
  4. Amplification and Visualization

    1. Front Matter

      Pages 131-131
    2. Simple Sequence Repeats Amplification

      • Kundapura V. Ravishankar, Padmakar Bommisetty
      Pages 133-138
    3. Development of a Multiplex PCR Assay for Characterization of Embryonic Stem Cells

      • Rajarshi Pal, Murali Krishna Mamidi, Anjan Kumar Das, Mahendra Rao, Ramesh Bhonde
      Pages 147-166
  5. Automated Capillary Sequencers

    1. Front Matter

      Pages 179-179
    2. Microsatellite Fragment Analysis Using the ABI Prism ® 377 DNA Sequencer

      • Mark A. Renshaw, Melissa Giresi, J. Orville Adams
      Pages 181-196
    3. Robust and Inexpensive SSR Markers Analyses Using LI-COR DNA Analyzer

      • Maria del Rosario Herrera, Marc Ghislain
      Pages 197-205
    4. Analyzing Microsatellites Using the QIAxcel System

      • Deborah A. Dean, Phillip A. Wadl, Denita Hadziabdic, Xinwang Wang, Robert N. Trigiano
      Pages 223-243

About this book

Microsatellites or simple sequence repeats (SSRs) have become the markers of choice for a variety of molecular studies because of their versatility, operational flexibility, and lower cost than other marker systems.  Microsatellites: Methods and Protocols brings together experts in the field to cover this significant area of research.  Broken in to four convenient parts, this volume delves into classical and modern methods for the discovery and development of microsatellite markers, descriptions of amplification and visualization of SSRs, automated capillary sequencers that are widely used for fragment analysis, as well as a variety of methods for the analysis of data obtained by the use of microsatellites. Written for the highly successful Methods in Molecular Biology™ series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

 

Authoritative and invaluable, Microsatellites: Methods and Protocols aims at researchers that need detailed protocols for incorporating microsatellite markers into their projects and expert scientists looking to expand their knowledge of SSRs discovery, use, and analysis.

Editors and Affiliations

  • , Department of Plant, Soil,, Southern Illinois University, Carbondale, Carbondale, USA

    Stella K. Kantartzi

Bibliographic Information

  • Book Title: Microsatellites

  • Book Subtitle: Methods and Protocols

  • Editors: Stella K. Kantartzi

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-62703-389-3

  • Publisher: Humana Totowa, NJ

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media, LLC 2013

  • Hardcover ISBN: 978-1-62703-388-6Published: 02 April 2013

  • Softcover ISBN: 978-1-4939-6309-6Published: 23 August 2016

  • eBook ISBN: 978-1-62703-389-3Published: 02 April 2013

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: XI, 339

  • Topics: Human Genetics

Buy it now

Buying options

eBook USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access