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  • Book
  • © 2015

The Nucleus

Editors:

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts
  • Includes supplementary material: sn.pub/extras

Part of the book series: Methods in Molecular Biology (MIMB, volume 1228)

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Table of contents (17 protocols)

  1. Front Matter

    Pages i-xi
  2. Isolation of Nuclei

    1. Front Matter

      Pages 1-1
    2. Lysis Gradient Centrifugation: A Flexible Method for the Isolation of Nuclei from Primary Cells

      • Karl Katholnig, Marko Poglitsch, Markus Hengstschläger, Thomas Weichhart
      Pages 15-23
  3. Nucleoli

    1. Front Matter

      Pages 33-33
    2. A New Rapid Method for Isolating Nucleoli

      • Zhou Fang Li, Yun Wah Lam
      Pages 35-42
  4. Genes and Chromatin

    1. Front Matter

      Pages 53-53
    2. Purification of Specific Chromatin Loci for Proteomic Analysis

      • Stephanie D. Byrum, Sean D. Taverna, Alan J. Tackett
      Pages 83-92
    3. Chromatin Structure Analysis of Single Gene Molecules by Psoralen Cross-Linking and Electron Microscopy

      • Christopher R. Brown, Julian A. Eskin, Stephan Hamperl, Joachim Griesenbeck, Melissa S. Jurica, Hinrich Boeger
      Pages 93-121
    4. Purification of Proteins on Newly Synthesized DNA Using iPOND

      • Huzefa Dungrawala, David Cortez
      Pages 123-131
    5. Applying the Ribopuromycylation Method to Detect Nuclear Translation

      • Alexandre David, Jonathan W. Yewdell
      Pages 133-142
  5. The Intranuclear Milieu

    1. Front Matter

      Pages 143-143
    2. Targeted Nano Analysis of Water and Ions in the Nucleus Using Cryo-Correlative Microscopy

      • Frédérique Nolin, Dominique Ploton, Laurence Wortham, Pavel Tchelidze, Hélène Bobichon, Vincent Banchet et al.
      Pages 145-158
    3. A Redox-Sensitive Yellow Fluorescent Protein Sensor for Monitoring Nuclear Glutathione Redox Dynamics

      • Agata Banach-Latapy, Michèle Dardalhon, Meng-Er Huang
      Pages 159-169
  6. Imaging Nuclear Structures

    1. Front Matter

      Pages 171-171

About this book

This volume presents detailed, recently-developed protocols ranging from isolation of nuclei to purification of chromatin regions containing single genes, with a particular focus on some less well-explored aspects of the nucleus. The methods described include new strategies for isolation of nuclei, for purification of cell type-specific nuclei from a mixture, and for rapid isolation and fractionation of nucleoli. For gene delivery into and expression in nuclei, a novel gentle approach using gold nanowires is presented. As the concentration and localization of water and ions are crucial for macromolecular interactions in the nucleus, a new approach to measure these parameters by correlative optical and cryo-electron microscopy is described. The Nucleus, Second Edition presents methods and software for high-throughput quantitative analysis of 3D fluorescence microscopy images, for quantification of the formation of amyloid fibrils in the nucleus, and for quantitative analysis of chromosome territory localization. Written in the successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible protocols, and notes on troubleshooting and avoiding known pitfalls.

 

Authoritative and easily accessible, The Nucleus, Second Edition seeks to serve both professionals and novices with its well-honed methods for the study of the nucleus.

Editors and Affiliations

  • Laval University Cancer Research Center, Québec, Canada

    Ronald Hancock

Bibliographic Information

  • Book Title: The Nucleus

  • Editors: Ronald Hancock

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-4939-1680-1

  • Publisher: Humana New York, NY

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media New York 2015

  • Hardcover ISBN: 978-1-4939-1679-5Published: 14 October 2014

  • Softcover ISBN: 978-1-4939-4873-4Published: 23 August 2016

  • eBook ISBN: 978-1-4939-1680-1Published: 13 October 2014

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 2

  • Number of Pages: XI, 237

  • Number of Illustrations: 19 b/w illustrations, 35 illustrations in colour

  • Topics: Cell Biology

Buy it now

Buying options

eBook USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 54.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access