Overview
- Reviews the entire modern field of DNA/RNA computations
- Fully integrated approach
Part of the book series: Challenges and Advances in Computational Chemistry and Physics (COCH, volume 2)
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About this book
Computational Studies of RNA and DNA includes, in an integrated way, modern computational studies of nucleic acids, ranging from advanced electronic structure quantum chemical calculations through explicit solvent molecular dynamics (MD) simulations up to mesoscopic modelling, with the main focus given to the MD field. It gives an equal emphasis to the leading methods and applications while successes, as well as pitfalls of the computational techniques are discussed.
The systems and problems considered include:
- Basic principles of nucleic acid structure and structural databases
- Introduction to key molecular modelling tools and methods
- Application of atomistic simulations to a wide variety of DNA and RNA systems
- Accurate QM calculations of base pairing, stacking and cation binding
- Charge transfer, excited states and NMR parameters
- Calculating mechanical properties of nucleic acids
- Mesoscopic simulation of DNA, chromatin modelling
This book is ideally suited to academics and researchers in organic and computational chemistry, structural molecular biology and biophysics as well as biochemistry, and particularly those interested in the molecular modelling of nucleic acids.
Besides the state-of-the-art science, the book also provides extensive introductory information for non-specialists and students to enter and understand this field.
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Table of contents (24 chapters)
Editors and Affiliations
Bibliographic Information
Book Title: Computational studies of RNA and DNA
Editors: J. Šponer, F. Lankaš
Series Title: Challenges and Advances in Computational Chemistry and Physics
DOI: https://doi.org/10.1007/978-1-4020-4851-3
Publisher: Springer Dordrecht
eBook Packages: Chemistry and Materials Science, Chemistry and Material Science (R0)
Copyright Information: Springer Science+Business Media B.V. 2006
Hardcover ISBN: 978-1-4020-4794-7Published: 20 September 2006
Softcover ISBN: 978-90-481-7195-8Published: 25 November 2010
eBook ISBN: 978-1-4020-4851-7Published: 05 October 2006
Series ISSN: 2542-4491
Series E-ISSN: 2542-4483
Edition Number: 1
Number of Pages: XII, 638
Topics: Organic Chemistry, Theoretical and Computational Chemistry, Computer Applications in Chemistry, Math. Applications in Chemistry