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RNA Bioinformatics

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  • © 2021
  • Latest edition

Overview

  • Includes cutting-edge techniques
  • Provides step-by-step detail essential for reproducible results
  • Contains key implementation from the experts

Part of the book series: Methods in Molecular Biology (MIMB, volume 2284)

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About this book

This detailed book aims to provide an overview of novel bioinformatics resources for exploring diverse aspects of RNA biology. This edition focuses on methods dealing with non-coding RNA (miRNAs, circRNAs or lncRNAs), RNA modifications (m6A or RNA editing), single cell RNA-seq and statistical models to handle count data from RNA-seq experiments. The book also includes chapters based on the classical RNA bioinformatics methods, such as those for deciphering secondary and tertiary RNA structures; however, they are revised to take into account deep sequencing data. Finally, chapters describing methods to analyze RNA sequencing data from emerging third generation sequencing technologies that could provide interesting insights into the transcriptional process and its regulation are also included. 

Written for the highly successful Methods in Molecular Biology series, chapters include the kind of expert implementation advice that encourages quality results. Comprehensive and up-to-date, RNA Bioinformatics, Second Edition serves as an ideal guide for researchers digging ever-deeper into the depths of the study of RNAs.


The chapter 'RNA-Seq Data Analysis in Galaxy' is open access under a CC BY 4.0 license.

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Keywords

Table of contents (32 protocols)

Editors and Affiliations

  • Dipartimento Di Bioscienze Biotecnologie E Biofarmaceutica, Università degli Studi di Bari Aldo Moro, Bari, Italy

    Ernesto Picardi

Bibliographic Information

  • Book Title: RNA Bioinformatics

  • Editors: Ernesto Picardi

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-0716-1307-8

  • Publisher: Humana New York, NY

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media, LLC, part of Springer Nature 2021

  • Hardcover ISBN: 978-1-0716-1306-1Published: 10 April 2021

  • Softcover ISBN: 978-1-0716-1309-2Published: 10 April 2022

  • eBook ISBN: 978-1-0716-1307-8Published: 09 April 2021

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 2

  • Number of Pages: XIV, 581

  • Number of Illustrations: 25 b/w illustrations, 178 illustrations in colour

  • Topics: Biochemistry, general, Bioinformatics

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