Book 2002

Methods of Microarray Data Analysis II

Papers from CAMDA’ 01

Editors:

ISBN: 978-1-4020-7111-9 (Print) 978-0-306-47598-6 (Online)

Table of contents (14 chapters)

  1. Front Matter

    Pages i-xi

  2. No Access

    Chapter

    Pages 1-7

    Introduction

  3. No Access

    Chapter

    Pages 9-21

    An Introduction to DNA Microarrays

  4. No Access

    Chapter

    Pages 23-41

    Experimental Design for Gene Microarray Experiments and Differential Expression Analysis

  5. No Access

    Chapter

    Pages 43-63

    Microarray Data Processing and Analysis

  6. No Access

    Chapter

    Pages 65-79

    Biology-driven Clustering of Microarray Data

  7. No Access

    Chapter

    Pages 81-90

    Extracting Global Structure from Gene Expression Profiles

  8. No Access

    Chapter

    Pages 91-103

    Supervised Neural Networks for Clustering Conditions in DNA Array Data After Reducing Noise by Clustering Gene Expression Profiles

  9. No Access

    Chapter

    Pages 105-122

    Bayesian Decomposition Analysis of Gene Expression in Yeast Deletion Mutants

  10. No Access

    Chapter

    Pages 123-137

    Using Functional Genomic Units to Corroborate User Experiments with the Rosetta Compendium

  11. No Access

    Chapter

    Pages 139-149

    Fishing Expedition - a Supervised Approach to Extract Patterns from a Compendium of Expression Profiles

  12. No Access

    Chapter

    Pages 151-167

    Modeling Pharmacogenomics of the NCI-60 Anticancer Data Set: Utilizing Kernel Pls to Correlate the Microarray Data to Therapeutic Responses

  13. No Access

    Chapter

    Pages 169-184

    Analysis of Gene Expression Profiles and Drug Activity Patterns by Clustering and Bayesian Network Learning

  14. No Access

    Chapter

    Pages 185-194

    Evaluation of Current Methods of Testing Differential Gene expression and Beyond

  15. No Access

    Chapter

    Pages 195-209

    Extracting Knowledge from Genomic Experiments by Incorporating the Biomedical Literature

  16. Back Matter

    Pages 211-214