This volume contains the proceedings of a workshop held in Melbourne, Australia, entitled "Coupling of Fluids, Structures and Waves in Aeronautics". The 22 papers deal with new computational methods for multi-disciplinary design in aeronautics. They are grouped into chapters on fluids, structures, electromagnetics, optimisation, mathematical methods and tools, and aircraft design. Several papers treat coupling of these themes in a multi-physics setting. Included is a 17-page report of a Round Table discussion entitled "Future Tools for Design and Manufacture of Innovative Products in the Aeronautics Industry", together with a summary of important themes and issues. This research promotes the advanced technologies necessary for continued development of efficient and environmentally sustainable transport systems.