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Bioinformatics Research and Applications

14th International Symposium, ISBRA 2018, Beijing, China, June 8-11, 2018, Proceedings

  • Fa Zhang
  • Zhipeng Cai
  • Pavel Skums
  • Shihua Zhang
Conference proceedings ISBRA 2018

Part of the Lecture Notes in Computer Science book series (LNCS, volume 10847)

Also part of the Lecture Notes in Bioinformatics book sub series (LNBI, volume 10847)

Table of contents

  1. Front Matter
    Pages I-XXII
  2. Network Analysis and Modelling

    1. Front Matter
      Pages 1-1
    2. Huiyu Li, Sheng-Jun Li, Junliang Shang, Jin-Xing Liu, Chun-Hou Zheng
      Pages 26-37
    3. Siyu Zhao, Ruiqing Zheng, Xiang Chen, Yaohang Li, Fang-Xiang Wu, Min Li
      Pages 38-48
  3. Genomic Data Analysis

    1. Front Matter
      Pages 49-49
    2. Tunazzina Islam, Desh Ranjan, Eleanor Young, Ming Xiao, Mohammad Zubair, Harold Riethman
      Pages 63-78
  4. Cancer Data Analysis

  5. Structure and Interaction

    1. Front Matter
      Pages 137-137
    2. Zhen Zhang, Jianxin Wang, Junwei Luo, Juan Shang, Min Li, Fang-Xiang Wu et al.
      Pages 139-150
    3. Canshang Deng, Qingfeng Chen, Zhixian Liu, Ruiqing Zheng, Jin Liu, Jianxin Wang et al.
      Pages 151-162
    4. Ilmi Fadhilah Rizki, Mochammad Arfin Fardiansyah Nasution, Syafrida Siregar, Mega Maulina Ekawati, Usman Sumo Friend Tambunan
      Pages 179-184
    5. Satya Anindita, Atika Marnolia, Hersal Hermana Putra, Muhammad Chandra Haikal, Usman Sumo Friend Tambunan
      Pages 185-190
  6. HPC and CryoEM

    1. Front Matter
      Pages 191-191
    2. Daniel W. Schultz, Bojian Xu
      Pages 193-204
    3. Jingrong Zhang, Zihao Wang, Yu Chen, Zhiyong Liu, Fa Zhang
      Pages 205-216
    4. Ke Huang, Shubo Yang, Zhaojian Luo, Ke Yang, Menghan Chen, Guopeng Wei et al.
      Pages 227-232
    5. Devin Haslam, Salim Sazzed, Willy Wriggers, Julio Kovcas, Junha Song, Manfred Auer et al.
      Pages 233-238
  7. Machine and Deep Learning

    1. Front Matter
      Pages 239-239
    2. Liyuan Liu, Meng Han, Yiyun Zhou, Yan Wang
      Pages 259-264
    3. Ping Luo, Li-Ping Tian, Bolin Chen, Qianghua Xiao, Fang-Xiang Wu
      Pages 265-271
  8. Data Analysis and Methodology

    1. Front Matter
      Pages 273-273
    2. Letu Qingge, Killian Smith, Sean Jungst, Binhai Zhu
      Pages 275-286
    3. Yubao Wu, Pavel Skums, Alex Zelikovsky, David Campo Rendon, Xueting Liao
      Pages 314-318
  9. Analysis and Visualization Tools

    1. Front Matter
      Pages 319-319
    2. Jucheol Moon, Oliver Eulenstein
      Pages 321-332
  10. RNA-Seq Data Analysis

    1. Front Matter
      Pages 333-333
    2. Krzysztof Gogolewski, Maciej Sykulski, Neo Christopher Chung, Anna Gambin
      Pages 335-346
    3. Marmar Moussa, Ion I. Măndoiu
      Pages 347-360
  11. Back Matter
    Pages 361-362

About these proceedings

Introduction

This book constitutes the proceedings of the 14th International Conference on Bioinformatics Research and Applications, ISBRA 2018, held in Beijing, China, in June 2018.

The 24 full and 10 short papers presented in this volume were carefully reviewed and selected from a total of 138 submissions. They were organized in topical sections named: network analysis and modelling; genomic data analysis; cancer data analysis; structure and interaction; HPC and CryoEM; machine and deep learning; data analysis and methodology; analysis and visualization tools; and RNA-Seq data analysis.

Keywords

artificial intelligence bioinformatics cross-validation CUDA genes gpu parallel algorithms parallel processing systems problem solving processors semantics Support Vector Machines (SVM) biomedical databases biomolecular imaging comparative genomics gene expression analysis structural biology molecular modeling

Editors and affiliations

  • Fa Zhang
    • 1
  • Zhipeng Cai
    • 2
  • Pavel Skums
    • 3
  • Shihua Zhang
    • 4
  1. 1.Chinese Academy of SciencesBeijingChina
  2. 2.Georgia State UniversityAtlantaUSA
  3. 3.Georgia State UniversityAtlantaUSA
  4. 4.Chinese Academy of SciencesBeijingChina

Bibliographic information

  • DOI https://doi.org/10.1007/978-3-319-94968-0
  • Copyright Information Springer International Publishing AG, part of Springer Nature 2018
  • Publisher Name Springer, Cham
  • eBook Packages Computer Science
  • Print ISBN 978-3-319-94967-3
  • Online ISBN 978-3-319-94968-0
  • Series Print ISSN 0302-9743
  • Series Online ISSN 1611-3349
  • Buy this book on publisher's site