Algorithms for Computational Biology

First International Conference, AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns

  • Adrian-Horia Dediu
  • Carlos Martín-Vide
  • Bianca Truthe
Part of the Lecture Notes in Computer Science book series (LNCS, volume 8542)

Table of contents

  1. Front Matter
  2. Invited Talks

    1. Michael Y. Galperin, Eugene V. Koonin
      Pages 1-24
  3. Regular Papers

    1. Ernst Althaus, Andreas Hildebrandt, Anna Katharina Hildebrandt
      Pages 25-34
    2. Liana Amaya Moreno, Ozlem Defterli, Armin Fügenschuh, Gerhard-Wilhelm Weber
      Pages 35-46
    3. Thiago da Silva Arruda, Ulisses Dias, Zanoni Dias
      Pages 59-70
    4. Alexander Grigoriev, Steven Kelk, Nela Lekić
      Pages 71-82
    5. Ivo Hedtke, Ioana Lemnian, Matthias Müller-Hannemann, Ivo Grosse
      Pages 83-94
    6. Bogdan Iancu, Diana-Elena Gratie, Sepinoud Azimi, Ion Petre
      Pages 95-106
    7. Kaname Kojima, Naoki Nariai, Takahiro Mimori, Yumi Yamaguchi-Kabata, Yukuto Sato, Yosuke Kawai et al.
      Pages 107-118
    8. Claire Lemaitre, Liviu Ciortuz, Pierre Peterlongo
      Pages 119-130
    9. Laurent Lemarchand, Reinhardt Euler, Congping Lin, Imogen Sparkes
      Pages 131-145
    10. Carla Negri Lintzmayer, Zanoni Dias
      Pages 158-170
    11. Sean Maxwell, Mark R. Chance, Mehmet Koyutürk
      Pages 171-182
    12. Giuseppe Narzisi, Bud Mishra, Michael C. Schatz
      Pages 183-195
    13. Amina Noor, Aitzaz Ahmad, Bilal Wajid, Erchin Serpedin, Mohamed Nounou, Hazem Nounou
      Pages 196-207
    14. Tomohiko Ohtsuki, Naoki Nariai, Kaname Kojima, Takahiro Mimori, Yukuto Sato, Yosuke Kawai et al.
      Pages 208-219
    15. Dimitris Polychronopoulos, Anastasia Krithara, Christoforos Nikolaou, Giorgos Paliouras, Yannis Almirantis, George Giannakopoulos
      Pages 220-234
    16. David A. Rosenblueth, Stalin Muñoz, Miguel Carrillo, Eugenio Azpeitia
      Pages 235-246

About these proceedings

Introduction

This book constitutes the refereed proceedings of the First International Conference, AlCoB 2014, held in July 2014 in Tarragona, Spain.

The 20 revised full papers were carefully reviewed and selected from 39 submissions. The scope of AlCoB includes topics of either theoretical or applied interest, namely: exact sequence analysis, approximate sequence analysis, pairwise sequence alignment, multiple sequence alignment, sequence assembly, genome rearrangement, regulatory motif finding, phylogeny reconstruction, phylogeny comparison, structure prediction, proteomics: molecular pathways, interaction networks, transcriptomics: splicing variants, isoform inference and quantification, differential analysis, next-generation sequencing: population genomics, metagenomics, metatranscriptomics, microbiome analysis, systems biology.

Keywords

algorithms bioinformatics combinatorics computational biology computational complexity discrete mathematics genome alignments graph algorithms graph theory interaction networks microbiome analysis molecular networks phylogeny proteomics sequence alignment sequence analysis sequence assembly structure prediction systems biology transcriptomics

Editors and affiliations

  • Adrian-Horia Dediu
    • 1
  • Carlos Martín-Vide
    • 1
  • Bianca Truthe
    • 2
  1. 1.Research Group on Mathematical LinguisticsRovira i Virgili UniversityTarragonaSpain
  2. 2.Fachbereich 07, Institut für InformatikJustus-Liebig-UniversitätGießenGermany

Bibliographic information

  • DOI https://doi.org/10.1007/978-3-319-07953-0
  • Copyright Information Springer International Publishing Switzerland 2014
  • Publisher Name Springer, Cham
  • eBook Packages Computer Science
  • Print ISBN 978-3-319-07952-3
  • Online ISBN 978-3-319-07953-0
  • Series Print ISSN 0302-9743
  • Series Online ISSN 1611-3349
  • About this book