Mass Spectrometry Data Analysis in Proteomics

  • Rune Matthiesen

Part of the Methods in Molecular Biology book series (MIMB, volume 1007)

Table of contents

  1. Front Matter
    Pages i-x
  2. Rune Matthiesen, Jakob Bunkenborg
    Pages 1-45
  3. Rune Matthiesen
    Pages 47-63
  4. Alan L. Rockwood, Magnus Palmblad
    Pages 65-99
  5. Alex A. Henneman, Magnus Palmblad
    Pages 101-118
  6. Rune Matthiesen, Ana Sofia Carvalho
    Pages 183-217
  7. Thomas E. Wales, Michael J. Eggertson, John R. Engen
    Pages 263-288
  8. Zhenxin Lin, David M. Lubman
    Pages 289-300
  9. Hugo Osório, Celso A. Reis
    Pages 301-316
  10. Catarina Fonseca, Paula Voabil, Ana Sofia Carvalho, Rune Matthiesen
    Pages 335-358
  11. H. C. Harsha, Sneha M. Pinto, Akhilesh Pandey
    Pages 359-377
  12. Yassene Mohammed, Magnus Palmblad
    Pages 379-391
  13. Back Matter
    Pages 393-405

About this book


Since the publishing of the first edition, the methodologies and instrumentation involved in the field of mass spectrometry-based proteomics has improved considerably.  Fully revised and expanded, Mass Spectrometry Data Analysis in Proteomics, Second Edition presents expert chapters on specific MS-based methods or data analysis strategies in proteomics. The volume covers data analysis topics relevant for quantitative proteomics, post translational modification, HX-MS, glycomics, and data exchange standards, among other topics.  Written in the highly successful Methods in Molecular Biology series format, chapters include brief introductions to their respective subjects, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.


Updated and authoritative, Mass Spectrometry Data Analysis in Proteomics, Second Edition serves as a detailed guide for all researchers seeking to further our knowledge in the field of proteomics.


Data analysis strategies Data exchange standards Glycomics HX-MS Mass spectrometry-based proteomics Post translational modification Quantitative proteomics

Editors and affiliations

  • Rune Matthiesen
    • 1
  1. 1.Inst. Molecular Pathology & ImmunologyUniversidade do Porto Inst. Molecular Pathology & ImmunologyPortoPortugal

Bibliographic information

  • DOI
  • Copyright Information Springer Science+Business Media, LLC 2013
  • Publisher Name Humana Press, Totowa, NJ
  • eBook Packages Springer Protocols
  • Print ISBN 978-1-62703-391-6
  • Online ISBN 978-1-62703-392-3
  • Series Print ISSN 1064-3745
  • Series Online ISSN 1940-6029
  • Buy this book on publisher's site