Transcription Factor Regulatory Networks

Methods and Protocols

  • Etsuko Miyamoto-Sato
  • Hiroyuki Ohashi
  • Hirotaka Sasaki
  • Jun-ichi Nishikawa
  • Hiroshi Yanagawa

Part of the Methods in Molecular Biology book series (MIMB, volume 1164)

Table of contents

  1. Front Matter
    Pages i-xi
  2. Zhibin Ning, Brett Hawley, Cheng-Kang Chiang, Deeptee Seebun, Daniel Figeys
    Pages 1-13
  3. Hiroyuki Ohashi, Shigeo Fujimori, Naoya Hirai, Hiroshi Yanagawa, Etsuko Miyamoto-Sato
    Pages 15-22
  4. Makiko Komata, Yuki Katou, Hiroshi Tanaka, Ryuichiro Nakato, Katsuhiko Shirahige, Masashige Bando
    Pages 33-38
  5. Kazuhisa Ota, Shu-Ying Feng, Takashi Ito
    Pages 39-50
  6. Sho Maekawa, Ayako Suzuki, Sumio Sugano, Yutaka Suzuki
    Pages 51-65
  7. Mitsuyoshi Murata, Hiromi Nishiyori-Sueki, Miki Kojima-Ishiyama, Piero Carninci, Yoshihide Hayashizaki, Masayoshi Itoh
    Pages 67-85
  8. Hideo Matsuda
    Pages 97-107
  9. Yukiko Matsuoka, Akira Funahashi, Samik Ghosh, Hiroaki Kitano
    Pages 121-145
  10. Norikazu Monma, Takashi Gojobori, Kazuho Ikeo
    Pages 147-162
  11. Taishin Akiyama, Junwen Qin, Daisuke Ohshima, Jun-ichiro Inoue
    Pages 163-170
  12. Kazuhiro Ikeda, Kuniko Horie-Inoue, Satoshi Inoue
    Pages 197-209
  13. Takahiro Suzuki, Jay W. Shin, Harukazu Suzuki
    Pages 211-218
  14. Back Matter
    Pages 219-220

About this book

Introduction

Transcription Factor Regulatory Methods details various techniques ranging from cutting-edge to general techniques use to study transcription factor regulatory networks. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls.

 

 Authoritative and practical, Transcription Factor Regulatory Methods aids scientists in the further study into post-genomic or the personal genomic era.

Keywords

generation sequencers genome human genome project personal genomic post-genomic transcription factor regulatory networks

Editors and affiliations

  • Etsuko Miyamoto-Sato
    • 1
  • Hiroyuki Ohashi
    • 2
  • Hirotaka Sasaki
    • 3
  • Jun-ichi Nishikawa
    • 4
  • Hiroshi Yanagawa
    • 5
  1. 1.Division of Interactome Medical ScienceThe University of Tokyo, The Institute of Medical ScienceMinato-kuJapan
  2. 2.Division of Interactome Medical ScienceThe University of Tokyo, The Institute of Medical ScienceMinato-kuJapan
  3. 3.Division of Interactome Medical ScienceThe University of Tokyo, The Institute of Medical ScienceMinato-kuJapan
  4. 4.Division of Interactome Medical ScienceThe University of Tokyo, The Institute of Medical ScienceMinato-kuJapan
  5. 5.Department of Biosciences and Informatics, Faculty of Science and TechnologyKeio UniversityKohoku-ku, YokohamaJapan

Bibliographic information

  • DOI https://doi.org/10.1007/978-1-4939-0805-9
  • Copyright Information Springer Science+Business Media New York 2014
  • Publisher Name Humana Press, New York, NY
  • eBook Packages Springer Protocols
  • Print ISBN 978-1-4939-0804-2
  • Online ISBN 978-1-4939-0805-9
  • Series Print ISSN 1064-3745
  • Series Online ISSN 1940-6029
  • About this book