Mixed effects models and extensions in ecology with R

  • Alain F. Zuur
  • Elena N. Ieno
  • Neil Walker
  • Anatoly A. Saveliev
  • Graham M.  Smith

Part of the Statistics for Biology and Health book series (SBH)

Table of contents

  1. Front Matter
    Pages i-xxii
  2. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 1-10
  3. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 11-33
  4. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 35-69
  5. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 71-100
  6. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 101-142
  7. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 143-160
  8. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 161-191
  9. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 193-208
  10. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 209-243
  11. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 245-259
  12. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 261-293
  13. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 295-321
  14. Alain F. Zuur, Elena N. Ieno, Neil J. Walker, Anatoly A. Saveliev, Graham M. Smith
    Pages 323-341
  15. A.F. Zuur, C. Barbraud, E.N. Ieno, H. Weimerskirch, G.M. Smith, N.J. Walker
    Pages 343-361
  16. A.F. Zuur, D. Raffaelli, A.A. Saveliev, N.J. Walker, E.N. Ieno, G.M. Smith
    Pages 363-381
  17. A.F. Zuur, A. Mira, F. Carvalho, E.N. Ieno, A.A. Saveliev, G.M. Smith et al.
    Pages 383-397
  18. A.F. Zuur, I.G. Priede, E.N. Ieno, G.M. Smith, A.A. Saveliev, N.J. Walker
    Pages 399-422
  19. A.F. Zuur, M.J Latuhihin, E.N. Ieno, J.G. Baretta-Bekker, G.M. Smith, N.J. Walker
    Pages 423-446
  20. A.F. Zuur, L.B. Gende, E.N. Ieno, N.J. Fernández, M.J. Eguaras, R. Fritz et al.
    Pages 447-458

About this book

Introduction

Building on the successful Analysing Ecological Data (2007) by Zuur, Ieno and Smith, the authors now provide an expanded introduction to using regression and its extensions in analysing ecological data. As with the earlier book, real data sets from postgraduate ecological studies or research projects are used throughout. The first part of the book is a largely non-mathematical introduction to linear mixed effects modelling, GLM and GAM, zero inflated models, GEE, GLMM and GAMM. The second part provides ten case studies that range from koalas to deep sea research. These chapters provide an invaluable insight into analysing complex ecological datasets, including comparisons of different approaches to the same problem. By matching ecological questions and data structure to a case study, these chapters provide an excellent starting point to analysing your own data. Data and R code from all chapters are available from www.highstat.com.

Alain F. Zuur is senior statistician and director of Highland Statistics Ltd., a statistical consultancy company based in the UK. He has taught statistics to more than 5000 ecologists. He is honorary research fellow in the School of Biological Sciences, Oceanlab, at the University of Aberdeen, UK.

Elena N. Ieno is senior marine biologist and co-director at Highland Statistics Ltd. She has been involved in guiding PhD students on the design and analysis of ecological data. She is honorary research fellow in the School of Biological Sciences, Oceanlab, at the University of Aberdeen, UK.

Neil J. Walker works as biostatistician for the Central Science Laboratory (an executive agency of DEFRA) and is based at the Woodchester Park research unit in Gloucestershire, South-West England. His work involves him in a number of environmental and wildlife biology projects.

Anatoly A. Saveliev is a professor at the Geography and Ecology Faculty at Kazan State University, Russian Federation, where he teaches GIS and statistics. He also provides consultancy in statistics, GIS & Remote Sensing, spatial modelling and software development in these areas.

Graham M. Smith is a director of AEVRM Ltd, an environmental consultancy in the UK and the course director for the MSc in ecological impact assessment at Bath Spa University in the UK.

Keywords

GLM R and ecology ecological analysis ecological statistics ecology environment mixed effects modeling phytoplankton plankton

Authors and affiliations

  • Alain F. Zuur
    • 1
  • Elena N. Ieno
    • 2
  • Neil Walker
    • 3
  • Anatoly A. Saveliev
    • 4
  • Graham M.  Smith
    • 5
  1. 1.Highland Statistics Ltd.NewburghUnited Kingdom
  2. 2.Highland Statistics Ltd.NewburghUnited Kingdom
  3. 3.Wildlife Disease Ecology TeamCentral Science LaboratoryNympsfield, GloucesterUnited Kingdom
  4. 4.Fac. Geography & EcologyKazan State UniversityKazanRussian Federation
  5. 5.School of Science and the Environment, Newton ParkBath Spa UniversityBath United Kingdom

Bibliographic information

  • DOI https://doi.org/10.1007/978-0-387-87458-6
  • Copyright Information Springer-Verlag New York 2009
  • Publisher Name Springer, New York, NY
  • eBook Packages Biomedical and Life Sciences
  • Print ISBN 978-0-387-87457-9
  • Online ISBN 978-0-387-87458-6
  • Series Print ISSN 1431-8776
  • Series Online ISSN 2197-5671
  • About this book